RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ZNF44P15621 663 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 ATF1P18846 271 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 PRKACGP22612 351 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 ISL1P61371 349 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 ATXN7L3Q14CW9 347 aaPredicted RBP6.38□□□□□ -1.39
USP39-216ENST00000490193 CDK5R1Q15078 307 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 PTGES3Q15185 160 aaKnown RBP6.38□□□□□ -1.39
USP39-216ENST00000490193 FAM27D1Q5T7N8 215 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 ASPHD1Q5U4P2 390 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
USP39-216ENST00000490193 ZNF429Q86V71 674 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 GID4Q8IVV7 300 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 PRSS35Q8N3Z0 413 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 FAM71E2Q8N5Q1 922 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 YIPF7Q8N8F6 280 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 ZNF565Q8N9K5 539 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 TMEM104Q8NE00 496 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 OR11H1Q8NG94 326 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 OR8H1Q8NGG4 311 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 OR13A1Q8NGR1 328 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 TMEM163Q8TC26 289 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 OPALINQ96PE5 141 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 TM2D3Q9BRN9 247 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 CHCHD6Q9BRQ6 235 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 ADI1Q9BV57 179 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
USP39-216ENST00000490193 EDA2RQ9HAV5 297 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 PLSCR3Q9NRY6 295 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 ZNF446Q9NWS9 450 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 HERC2O95714 4834 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 A0A1W2PQL4 384 aaPredicted RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 AQP12BA6NM10 295 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 NCBP2LA6PVI3 153 aaKnown RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 H3BSH0 61 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 I3L521 148 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 GAPDHP04406 335 aaKnown RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 ISG15P05161 165 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 OR2T7P0C7T2 308 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 OR5H8P0DN80 308 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 CD1BP29016 333 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 C21orf33P30042 268 aaPredicted RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 GLP1RP43220 463 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 KIR3DL2P43630 455 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 VEGFCP49767 419 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 BNIP1Q12981 228 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 KIAA0141Q14154 515 aaPredicted RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 C4orf46Q504U0 113 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 TMEM244Q5VVB8 128 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 FAHD1Q6P587 224 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 AQP12AQ8IXF9 295 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 OR10X1Q8NGY0 326 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 OR2T10Q8NGZ9 312 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 CANT1Q8WVQ1 401 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 LEAP2Q969E1 77 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 NRBF2Q96F24 287 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 UBE2E2Q96LR5 201 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 MBOAT4Q96T53 435 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 MED4Q9NPJ6 270 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 CHCHD3Q9NX63 227 aaKnown RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 H2AFY2Q9P0M6 372 aaPredicted RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 WARS2Q9UGM6 360 aaKnown RBP6.37□□□□□ -1.39
USP39-216ENST00000490193 KIF25Q9UIL4 384 aa6.37□□□□□ -1.39
USP39-216ENST00000490193 MEIKINA0A087WXM9 373 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ZAR1LA6NP61 321 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 B2RBV5 119 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 M0R129 80 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 DEGS1O15121 323 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 DCTN3O75935 186 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 APOL3O95236 402 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 IGHV3-7P01780 117 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 DBTP11182 482 aaKnown RBP6.36□□□□□ -1.39
USP39-216ENST00000490193 VDAC1P21796 283 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 PPIFP30405 207 aaKnown RBP6.36□□□□□ -1.39
USP39-216ENST00000490193 HTR1FP30939 366 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 KCNJ3P48549 501 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 MTNR1BP49286 362 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 GNG10P50151 68 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 SCN1BQ07699 218 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ZNF616Q08AN1 781 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 HSP90B2PQ58FF3 399 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 RSBN1Q5VWQ0 802 aaPredicted RBP6.36□□□□□ -1.39
USP39-216ENST00000490193 C12orf73Q69YU5 71 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ZFAND6Q6FIF0 208 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ELP2Q6IA86 826 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 FDX2Q6P4F2 183 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 OVCH2Q7RTZ1 564 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 MOB3BQ86TA1 216 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 RDH10Q8IZV5 341 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 LINC00311Q8N616 119 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 TCEANCQ8N8B7 351 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ZNF491Q8N8L2 437 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 C8orf31Q8N9H6 132 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ST6GALNAC6Q969X2 333 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 RFT1Q96AA3 541 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 FGGYQ96C11 551 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ISOC1Q96CN7 298 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 RNFT2Q96EX2 444 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 LRGUKQ96M69 825 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 S1PR3Q99500 378 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms