RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 BST1Q10588 318 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TSPAN31Q12999 210 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 GPR176Q14439 515 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 RSU1Q15404 277 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TATDN3Q17R31 274 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 IQCJQ1A5X6 159 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TMEM241Q24JQ0 296 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 HNRNPA1L2Q32P51 320 aaKnown RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 MAJINQ3KP22 176 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 PSMG4Q5JS54 123 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SPANXN3Q5MJ09 141 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 COL5A1-AS1Q5SY13 56 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 FAM162BQ5T6X4 162 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 PRAMEF20Q5VT98 475 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 RAET1LQ5VY80 246 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TPGS2Q68CL5 300 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ZNF470Q6ECI4 717 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 LPCAT3Q6P1A2 487 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TBPL2Q6SJ96 375 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 EPGNQ6UW88 154 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 CASP12Q6UXS9 341 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 CYHR1Q6ZMK1 362 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 GTF2H5Q6ZYL4 71 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 NDUFAF7Q7L592 441 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 BHLHA15Q7RTS1 189 aaPredicted RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SSX6Q7RTT6 188 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SLC16A14Q7RTX9 510 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 MOB3BQ86TA1 216 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ACOT1Q86TX2 421 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 CYP4Z1Q86W10 505 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SLC30A8Q8IWU4 369 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 CPNE9Q8IYJ1 553 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 C4orf33Q8N1A6 199 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 FAM58AQ8N1B3 248 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 OSR2Q8N2R0 312 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 GTPBP8Q8N3Z3 284 aaPredicted RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 Q8N402 240 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TOMM5Q8N4H5 51 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 CBR4Q8N4T8 237 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 KCNRGQ8N5I3 272 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 YIPF7Q8N8F6 280 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 NECAP1Q8NC96 275 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ZNF738Q8NE65 137 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 GMCL1P1Q8NEA9 526 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 OR4C5Q8NGB2 326 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 OR4F6Q8NGB9 312 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 OR5B17Q8NGF7 314 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 OR8S1Q8NH09 359 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 DYNC2LI1Q8TCX1 351 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 RNF139Q8WU17 664 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TSEN15Q8WW01 171 aaKnown RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 FAM3CQ92520 227 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 FBXO32Q969P5 355 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TMBIM1Q969X1 311 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ISG20Q96AZ6 181 aaKnown RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TMEM159Q96B96 161 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 DNAJC19Q96DA6 116 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 DYNLL2Q96FJ2 89 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 S100A16Q96FQ6 103 aaKnown RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 RNF170Q96K19 258 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 CCDC115Q96NT0 180 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SLC38A2Q96QD8 506 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 OR4K3Q96R72 315 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 PANX1Q96RD7 426 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 STACQ99469 402 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SORT1Q99523 831 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 CDX2Q99626 313 aaPredicted RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 MRPL45Q9BRJ2 306 aaKnown RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 MARVELD1Q9BSK0 173 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 TPPP3Q9BW30 176 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 HSD3B7Q9H2F3 369 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 GORASP2Q9H8Y8 452 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 REEP1Q9H902 201 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 NMRAL1Q9HBL8 299 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 EXOSC4Q9NPD3 245 aaKnown RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ISYNA1Q9NPH2 558 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ACOT13Q9NPJ3 140 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SPANXB1Q9NS25 103 aaPredicted RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 BET1LQ9NYM9 111 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 RASL12Q9NYN1 266 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 NINJ2Q9NZG7 142 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 GCNT4Q9P109 453 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 OPTCQ9UBM4 332 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 RPH3ALQ9UNE2 315 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SLC7A11Q9UPY5 501 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 F11RQ9Y624 299 aaKnown RBP1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ARL5AQ9Y689 179 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SLC22A7Q9Y694 548 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 ATAD5Q96QE3 1844 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 SCN1AP35498 2009 aa1.6□□□□□ -2.15
HMGN1-218ENST00000490032 YLPM1P49750 1951 aaKnown RBP1.59□□□□□ -2.15
HMGN1-218ENST00000490032 SPEF2Q9C093 1822 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 FER1L6Q2WGJ9 1857 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 A0A087WZY1 265 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 BORCS7-ASMTA0A0B4J1R7 106 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 LOC285095A0A1B0GVY8 99 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 TCRBV3S1A0A5B6 114 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 MEIS3P1A6NDR6 274 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 GGT3PA6NGU5 568 aa1.59□□□□□ -2.15
HMGN1-218ENST00000490032 SUPT3HB4E1H0 165 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms