RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CCDC112Q8NEF3 446 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 OR1P1Q8NH06 330 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 NT5CQ8TCD5 201 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 SPPL2BQ8TCT7 592 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC37A2Q8TED4 501 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 BLNKQ8WV28 456 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 GEMIN6Q8WXD5 167 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 FXYD5Q96DB9 178 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 OR10C1Q96KK4 312 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 CEP170P1Q96L14 293 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 RDH12Q96NR8 316 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 SDHCQ99643 169 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 ARHGDIGQ99819 225 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 EBNA1BP2Q99848 306 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 CHCHD5Q9BSY4 110 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 GNB4Q9HAV0 340 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 DDX19AQ9NUU7 478 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 AIG1Q9NVV5 245 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 UVRAGQ9P2Y5 699 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF629Q9UEG4 869 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 FARSAQ9Y285 508 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 HES2Q9Y543 173 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 COL1A2P08123 1366 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 TANC1Q9C0D5 1861 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 MICAL3Q7RTP6 2002 aa2.32□□□□□ -2.04
DEPDC1-204ENST00000489862 EFCAB9A8MZ26 197 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 KRTAP4-16G5E9R7 235 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 MFNGO00587 321 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 DENRO43583 198 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 FADS1O60427 444 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 GCM2O75603 506 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 KBTBD11O94819 623 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 IGHV3-43DP0DP04 118 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ESDP10768 282 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 FOLR2P14207 255 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 CXCL3P19876 107 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 CFL1P23528 166 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 PYCR1P32322 319 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 RPA3P35244 121 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 POLR2IP36954 125 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 LGALS7P47929 136 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 AP2S1P53680 142 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TAS2R46P59540 309 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 PRDX1Q06830 199 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 GUK1Q16774 197 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM176BQ3YBM2 270 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TEX43Q6ZNM6 134 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 LYG2Q86SG7 212 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 PRNTQ86SH4 94 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 GID4Q8IVV7 300 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 C11orf53Q8IXP5 236 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 LGI3Q8N145 548 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 GATD1Q8NB37 220 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM161BQ8NDZ6 487 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR51D1Q8NGF3 324 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ZFP90Q8TF47 636 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 S100PBPQ96BU1 408 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 DDIT4LQ96D03 193 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 Q96MT0 163 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 C18orf15Q96N68 181 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 WFIKKN1Q96NZ8 548 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 CDX2Q99626 313 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF184Q99676 751 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR51E2Q9H255 320 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 Q9H3A6 140 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ZSCAN16Q9H4T2 348 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ASB7Q9H672 318 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 RBM22Q9NW64 420 aaKnown RBP eCLIP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM206AQ9NX38 181 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 RBM12B-AS1Q9P1G2 102 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 PSG8Q9UQ74 426 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 GINS2Q9Y248 185 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 NCOR1O75376 2440 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 FRYLO94915 3013 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 MYO15AQ9UKN7 3530 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 VPS13AQ96RL7 3174 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ATG2AQ2TAZ0 1938 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 IGLV7-46A0A075B6I9 117 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TRAV39A0A0B4J263 110 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 A0A0B4J2A0 478 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 A0A1B0GUA9 196 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 DAPL1A0PJW8 107 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 KPNA3O00505 521 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 LAD1O00515 517 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TAAR5O14804 337 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC35G6P0C7Q6 338 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ERGP11308 486 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 GABRA1P14867 456 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 AKR1C4P17516 323 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 RCC1P18754 421 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 F8A1P23610 371 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 GATA2P23769 480 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR3A4PP47883 348 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 IDH3GP51553 393 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR4D2P58180 307 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 INCA1Q0VD86 236 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TTLL9Q3SXZ7 439 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SYT6Q5T7P8 510 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OGFRL1Q5TC84 451 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms