RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HAX1O00165 279 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 RAB27BO00194 218 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 SULT1C2O00338 296 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 TMPRSS2O15393 492 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 XRCC3O43542 346 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 ZNF780AO75290 641 aaPredicted RBP8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 FCN3O75636 299 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 CRTAPO75718 401 aaPredicted RBP8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 TFF1P04155 84 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 COMPP49747 757 aaPredicted RBP8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 TMEM50BP56557 158 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 RAB25P57735 213 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 BPIFB3P59826 476 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 UBA52P62987 128 aaKnown RBP8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 TMEM69Q5SWH9 247 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 Q6P435 159 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 SLC36A1Q7Z2H8 476 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 NRARPQ7Z6K4 114 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 FAM58AQ8N1B3 248 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 OSR2Q8N2R0 312 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 SIGLECL1Q8N7X8 197 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 SMIM4Q8WVI0 70 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 GCDHQ92947 438 aaPredicted RBP8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 CREB3L1Q96BA8 519 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 TMEM59Q9BXS4 323 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 CST11Q9H112 138 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 ESM1Q9NQ30 184 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 RAB22AQ9UL26 194 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 MRPS7Q9Y2R9 242 aaKnown RBP8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 FBN3Q75N90 2809 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 ANK2Q01484 3957 aa8.72□□□□□ -1.01
SCAMP4-208ENST00000489554 IGHV3OR15-7A0A075B7D8 119 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 TRAV40A0A0B4J280 105 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 TMEM89A2RUT3 159 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 DVL1O14640 695 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 GEMIN2O14893 280 aaKnown RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 GPR37O15354 613 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 SOCS1O15524 211 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 DHFRP00374 187 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 IGHV4-38-2P0DP08 117 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 GTF2F2P13984 249 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 PRKACAP17612 351 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 GLRA1P23415 457 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 CEBPDP49716 269 aaPredicted RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 RAG2P55895 527 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 GMFBP60983 142 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 GPR176Q14439 515 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 IL13RA2Q14627 380 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF146Q15072 292 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 PDCD1Q15116 288 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 PLAC9Q5JTB6 97 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 GPR157Q5UAW9 335 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 STUMQ69YW2 141 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 AKAP14Q86UN6 197 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 Q8IYB0 196 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 CADM3Q8N126 398 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 BCL6BQ8N143 479 aaPredicted RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 CD177Q8N6Q3 437 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 ANGPTL6Q8NI99 470 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 EMG1Q92979 244 aaKnown RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 MRPS24Q96EL2 167 aaKnown RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 SELENOIQ9C0D9 397 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 C11orf54Q9H0W9 315 aaPredicted RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 DNTTIP1Q9H147 329 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 DPAGT1Q9H3H5 408 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 IFT22Q9H7X7 185 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 SEBOXQ9HB31 216 aaPredicted RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 ELL3Q9HB65 397 aaPredicted RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 RASL12Q9NYN1 266 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 RCC2Q9P258 522 aaKnown RBP8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 ST3GAL6Q9Y274 331 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 KCNK7Q9Y2U2 307 aa8.71□□□□□ -1.02
SCAMP4-208ENST00000489554 IGHV3OR16-10A0A075B7F0 116 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 A0A1B0GW55 424 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DNAJC9-AS1A6NH13 148 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 CLDN34H7C241 214 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 PLA2G10O15496 165 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 RBBP9O75884 186 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 TOX4O94842 621 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 NXPH2O95156 264 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 CYB5AP00167 134 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 KNG1P01042 644 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4L2P0CJ85 424 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4L3P0CJ86 424 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4L4P0CJ87 422 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4L5P0CJ88 424 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4L6P0CJ89 424 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4L7P0CJ90 424 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 PSG2P11465 335 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 PRTN3P24158 256 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 CDK2P24941 298 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 HLA-DMAP28067 261 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 CHATP28329 748 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUSP1P28562 367 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 RFX2P48378 723 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 SNU13P55769 128 aaKnown RBP8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 BAMBIQ13145 260 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 TAF9Q16594 264 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms