RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 A6NJ64 397 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 IGLL5B9A064 214 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 GOLGA8KD6RF30 607 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 GOLGA8MH3BSY2 632 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 LIN7AO14910 233 aaPredicted RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 NIPSNAP2O75323 286 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 PSIP1O75475 530 aaKnown RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 KCNK2O95069 426 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 ASS1P00966 412 aaKnown RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 HLA-AP01891 365 aaKnown RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 IGLV7-43P04211 117 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 F8A1P23610 371 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 GRPRP30550 384 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 RCVRNP35243 200 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 COILP38432 576 aaPredicted RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 GDI2P50395 445 aaKnown RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 TBC1D28Q2M2D7 210 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 TMEM144Q7Z5S9 345 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 SLC13A5Q86YT5 568 aaPredicted RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 ZFP82Q8N141 532 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 DTD1Q8TEA8 209 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.42□□□□□ -2.02
XRN1-213ENST00000489241 MAL2Q969L2 176 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 CLDN23Q96B33 292 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 PLA2G12AQ9BZM1 189 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 VSIRQ9H7M9 311 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 PLEKHJ1Q9NW61 149 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 V9GYY5 206 aaPredicted RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 SVILO95425 2214 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 HPGDSO60760 199 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 FSTL3O95633 263 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 ACTR1BP42025 376 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 MP68P56378 58 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 RBX1P62877 108 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 ENDOGQ14249 297 aaKnown RBP2.41□□□□□ -2.02
XRN1-213ENST00000489241 LY6EQ16553 131 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 C4orf26Q17RF5 130 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 DNLZQ5SXM8 178 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 TTC33Q6PID6 262 aaPredicted RBP2.41□□□□□ -2.02
XRN1-213ENST00000489241 CASP12Q6UXS9 341 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 MTERF4Q7Z6M4 381 aaKnown RBP2.41□□□□□ -2.02
XRN1-213ENST00000489241 AMN1Q8IY45 258 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 RIBC1Q8N443 379 aaPredicted RBP2.41□□□□□ -2.02
XRN1-213ENST00000489241 STOML3Q8TAV4 291 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 RBP7Q96R05 134 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 ZNF2Q9BSG1 426 aaPredicted RBP2.41□□□□□ -2.02
XRN1-213ENST00000489241 SHANK2-AS3Q9BTD1 123 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 CHST5Q9GZS9 411 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 DRC3Q9H069 523 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 INIPQ9NRY2 104 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 DYSFO75923 2080 aa2.41□□□□□ -2.02
XRN1-213ENST00000489241 IGHV1-45A0A0A0MS14 117 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 IGHV3-21A0A0B4J1V1 117 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 F5H5P2 479 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 CGB3P0DN86 165 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 CGB7P0DN87 165 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 PTHLHP12272 177 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 HIST1H1CP16403 213 aaKnown RBP2.4□□□□□ -2.03
XRN1-213ENST00000489241 HLA-DMAP28067 261 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 TGFBR2P37173 567 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 HSPA13P48723 471 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 RAB2AP61019 212 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 SKP2Q13309 424 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 MED21Q13503 144 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 PAFAH1B3Q15102 231 aaKnown RBP2.4□□□□□ -2.03
XRN1-213ENST00000489241 LRRC26Q2I0M4 334 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 CDKL4Q5MAI5 379 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 TMEM69Q5SWH9 247 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 SGPP2Q8IWX5 399 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 TMEM156Q8N614 296 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 TMEM251Q8N6I4 163 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 OR11L1Q8NGX0 322 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 DEDD2Q8WXF8 326 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 YIPF5Q969M3 257 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 RMI2Q96E14 147 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 REEP6Q96HR9 211 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 SEC22CQ9BRL7 303 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 SCRT1Q9BWW7 348 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 ZNF586Q9NXT0 402 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 DHCR7Q9UBM7 475 aaKnown RBP2.4□□□□□ -2.03
XRN1-213ENST00000489241 MARCOQ9UEW3 520 aaPredicted RBP2.4□□□□□ -2.03
XRN1-213ENST00000489241 MTCH2Q9Y6C9 303 aa2.4□□□□□ -2.03
XRN1-213ENST00000489241 IGKV1OR2-108A0A075B7D4 117 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 K7ERS5 55 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 CCRL2O00421 344 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 POP7O75817 140 aaKnown RBP2.39□□□□□ -2.03
XRN1-213ENST00000489241 TRGV3P03979 118 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 GABRA1P14867 456 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 S100A2P29034 98 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 CDC34P49427 236 aaPredicted RBP2.39□□□□□ -2.03
XRN1-213ENST00000489241 GTF2BQ00403 316 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 FMODQ06828 376 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 HLA-DRB5Q30154 266 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 DNAL1Q4LDG9 190 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 KRTAP13-2Q52LG2 175 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 LAIR2Q6ISS4 152 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 VN1R4Q7Z5H5 301 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms