RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TMEM170AQ8WVE7 144 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 RASL10BQ96S79 203 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 PLK3Q9H4B4 646 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 MANBALQ9NQG1 85 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 WNT16Q9UBV4 365 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 IGKV1-9A0A0C4DH69 117 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 B4DEV8 164 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 F2Z2F3 143 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 ADAM20O43506 726 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 FOXS1O43638 330 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 CELA2BP08218 269 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-229ENST00000488765 RPS16P62249 146 aaKnown RBP14.03□□□□□ -0.16
MCF2L-229ENST00000488765 HIST1H3AP68431 136 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 OR2T10Q8NGZ9 312 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 PRSS38A1L453 326 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 C17orf105B2RV13 164 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 FCGR2AP12318 317 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 POU3F1Q03052 451 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-229ENST00000488765 ZC2HC1AQ96GY0 325 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 OR10A5Q9H207 317 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 SMDT1Q9H4I9 107 aa14.03□□□□□ -0.16
MCF2L-229ENST00000488765 SHISA8B8ZZ34 492 aa14.02□□□□□ -0.16
MCF2L-229ENST00000488765 E9PLN8 166 aa14.02□□□□□ -0.16
MCF2L-229ENST00000488765 PDGFBP01127 241 aaPredicted RBP14.02□□□□□ -0.16
MCF2L-229ENST00000488765 CTSDP07339 412 aaPredicted RBP14.02□□□□□ -0.16
MCF2L-229ENST00000488765 CCKARP32238 428 aa14.02□□□□□ -0.16
MCF2L-229ENST00000488765 TMEM241Q24JQ0 296 aa14.02□□□□□ -0.16
MCF2L-229ENST00000488765 MCEMP1Q8IX19 187 aa14.02□□□□□ -0.16
MCF2L-229ENST00000488765 FAM206AQ9NX38 181 aa14.02□□□□□ -0.16
MCF2L-229ENST00000488765 MAP1BP46821 2468 aaKnown RBP14.02□□□□□ -0.17
MCF2L-229ENST00000488765 ETV2O00321 342 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-229ENST00000488765 MSTNO14793 375 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 RER1O15258 196 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 KIR2DL1P43626 348 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-229ENST00000488765 KISS1Q15726 138 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 EMC4Q5J8M3 183 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 TMEM92Q6UXU6 159 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 LIAT1Q6ZQX7 453 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 OR4C5Q8NGB2 326 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 WNT10AQ9GZT5 417 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 GPR35Q9HC97 309 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 RNF114Q9Y508 228 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 KIAA1549LQ6ZVL6 1849 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 SPRY1O43609 319 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-229ENST00000488765 SLC6A8P48029 635 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF726P1Q15940 193 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 KCNMB1Q16558 191 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 Q5PR19 223 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 Q6ZN92 141 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 PLPPR1Q8TBJ4 325 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 C11orf40Q8WZ69 217 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 NXF5Q9H1B4 397 aaKnown RBP14.02□□□□□ -0.17
MCF2L-229ENST00000488765 GAL3ST2Q9H3Q3 398 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 PNO1Q9NRX1 252 aaKnown RBP14.02□□□□□ -0.17
MCF2L-229ENST00000488765 TP73-AS1Q9UF72 201 aa14.02□□□□□ -0.17
MCF2L-229ENST00000488765 UBE2J1Q9Y385 318 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-229ENST00000488765 NKX6-3A6NJ46 265 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 SH2D1BO14796 132 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 ADH1BP00325 375 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 CRYABP02511 175 aaKnown RBP14.01□□□□□ -0.17
MCF2L-229ENST00000488765 RPL23P62829 140 aaKnown RBP14.01□□□□□ -0.17
MCF2L-229ENST00000488765 MFAP5Q13361 173 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 IL13RA2Q14627 380 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 Q6ZS52 159 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 RBMXL1Q96E39 390 aaKnown RBP14.01□□□□□ -0.17
MCF2L-229ENST00000488765 KNTC1P50748 2209 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 TNFRSF10CO14798 259 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 FAHP16930 419 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF10P21506 573 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-229ENST00000488765 RPS18P62269 152 aaKnown RBP14.01□□□□□ -0.17
MCF2L-229ENST00000488765 IL24Q13007 206 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 SAMD10Q9BYL1 202 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 S1PR5Q9H228 398 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 OR51I2Q9H344 312 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 TMEM9BQ9NQ34 198 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 ANXA10Q9UJ72 324 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 NCOR1O75376 2440 aa14.01□□□□□ -0.17
MCF2L-229ENST00000488765 LOC105371242A0A075B767 164 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 H3BML4 177 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 ISG15P05161 165 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 SERPINA7P05543 415 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 SLC35E2P0CK97 266 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF121P58317 390 aaPredicted RBP14□□□□□ -0.17
MCF2L-229ENST00000488765 LDLRAD2Q5SZI1 272 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 GRINAQ7Z429 371 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 CMTM2Q8TAZ6 248 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 MSI2Q96DH6 328 aaKnown RBP14□□□□□ -0.17
MCF2L-229ENST00000488765 ACY3Q96HD9 319 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 MRGPRX1Q96LB2 322 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 TMEM106BQ9NUM4 274 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF816-ZNF321PA0A0X1KG74 233 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 A0A1W2PQF6 199 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 MAP1LC3B2A6NCE7 125 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 SPINK4O60575 86 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF737O75373 536 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 UTS2O95399 124 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 GNRHRP30968 328 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 GPR3P46089 330 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 DUSP3P51452 185 aaPredicted RBP14□□□□□ -0.17
MCF2L-229ENST00000488765 PNRC1Q12796 327 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms