RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 RRBP1Q9P2E9 1410 aaKnown RBP0.86□□□□□ -2.27
SMC4-220ENST00000488017 FRMPD1Q5SYB0 1578 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 NALCNQ8IZF0 1738 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 IFT172Q9UG01 1749 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 NUP210LQ5VU65 1888 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 MYO5AQ9Y4I1 1855 aaKnown RBP0.86□□□□□ -2.27
SMC4-220ENST00000488017 CECR2Q9BXF3 1484 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 MRC2Q9UBG0 1479 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 CAMSAP1Q5T5Y3 1602 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 ABCA9Q8IUA7 1624 aa0.86□□□□□ -2.27
SMC4-220ENST00000488017 POLR3AO14802 1390 aaPredicted RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 MAP3K1Q13233 1512 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 AFDNP55196 1824 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 LOC100506127A0A0U1RQW1 187 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 FAM240AA0A1B0GVK7 77 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 A0A1W2PRF3 423 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 A0A1W2PRM7 423 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 RAB19A4D1S5 217 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ARGFXA6NJG6 315 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CENPXA8MT69 81 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 MIF4GDA9UHW6 222 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 ZNF879B4DU55 563 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ATP6V1G2-DDX39BF2Z307 99 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 H0YJX3 145 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 H3BQF6 201 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 hCG_2039718K7EN88 272 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 K7ERQ8 282 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 PSMD11O00231 422 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 PGRMC1O00264 195 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 UPK1AO00322 258 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ATP5HO75947 161 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 MYO1DO94832 1006 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 PLEKHA8P1O95397 391 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 NSA2O95478 260 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 IL6P05231 212 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CRHP06850 196 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 GP1BAP07359 652 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CTXN2P0C2S0 81 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 MLNP12872 115 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 G0S2P27469 103 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 PSMB6P28072 239 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SPAM1P38567 509 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 BLVRAP53004 296 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SPCS3P61009 180 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 RPL31P62899 125 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 SLC35B1P78383 322 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 HPCAP84074 193 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 FADDQ13158 208 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SLAMF1Q13291 335 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ATP6V1FQ16864 119 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 TMEM241Q24JQ0 296 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 NDUFAF6Q330K2 333 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 FAM27D1Q5T7N8 215 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CEP162Q5TB80 1403 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 TTC37Q6PGP7 1564 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CLEC18BQ6UXF7 455 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CLEC19AQ6UXS0 136 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 C4orf22Q6V702 233 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ASCL4Q6XD76 172 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SPNS3Q6ZMD2 512 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 IDO2Q6ZQW0 420 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SPATA31E1Q6ZUB1 1445 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 FAM231DQ6ZW35 169 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SLC35D2Q76EJ3 337 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 COPS6Q7L5N1 327 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 NELFCDQ8IXH7 590 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 EIF4E3Q8N5X7 224 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 ZNF555Q8NEP9 628 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 OR2K2Q8NGT1 345 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 OR6K6Q8NGW6 343 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 OR8S1Q8NH09 359 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 LHFPL5Q8TAF8 219 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 IFT81Q8WYA0 676 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 NUP205Q92621 2012 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 MBOAT7Q96N66 472 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SPZ1Q9BXG8 430 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 SRRQ9GZT4 340 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 FBXO44Q9H4M3 255 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ASB7Q9H672 318 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 TDRD3Q9H7E2 651 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 KIR3DX1Q9H7L2 352 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 C6orf50Q9HD87 102 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 TREM1Q9NP99 234 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 MRPL40Q9NQ50 206 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 PARP11Q9NR21 331 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 FAIMQ9NVQ4 179 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ARMC1Q9NVT9 282 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 NLE1Q9NVX2 485 aaPredicted RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 RBM22Q9NW64 420 aaKnown RBP eCLIP0.85□□□□□ -2.271e-6■■■■■ 28.1
SMC4-220ENST00000488017 COA4Q9NYJ1 87 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CLEC2DQ9UHP7 191 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ENPP5Q9UJA9 477 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 INO80Q9ULG1 1556 aaPredicted RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 TFR2Q9UP52 801 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 POFUT2Q9Y2G5 429 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 ZNF706Q9Y5V0 76 aaPredicted RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 LAMC3Q9Y6N6 1575 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CACNA1GO43497 2377 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 MYO18AQ92614 2054 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 UBR2Q8IWV8 1755 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms