RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ZNF222Q9UK12 451 aa7.93□□□□□ -1.14
SF3B1-211ENST00000487698 RNF115Q9Y4L5 304 aa7.93□□□□□ -1.14
SF3B1-211ENST00000487698 WIPI2Q9Y4P8 454 aa7.93□□□□□ -1.14
SF3B1-211ENST00000487698 EPG5Q9HCE0 2579 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 VSTM5A8MXK1 200 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF737O75373 536 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF205O95201 554 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 PLAUP00749 431 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 TFF1P04155 84 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 PSG2P11465 335 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 RPS2P15880 293 aaKnown RBP7.92□□□□□ -1.14
SF3B1-211ENST00000487698 AKR1C4P17516 323 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 RCC1P18754 421 aaPredicted RBP7.92□□□□□ -1.14
SF3B1-211ENST00000487698 PI3P19957 117 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 FCGR2CP31995 323 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 OR3A1P47881 315 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 KCNJ3P48549 501 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 HLA-DRB3P79483 266 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 TLE1Q04724 770 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 C2orf68Q2NKX9 166 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 C5orf24Q7Z6I8 188 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 NOXA1Q86UR1 476 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 C12orf45Q8N5I9 185 aaPredicted RBP7.92□□□□□ -1.14
SF3B1-211ENST00000487698 LILRB1Q8NHL6 650 aaPredicted RBP7.92□□□□□ -1.14
SF3B1-211ENST00000487698 MITD1Q8WV92 249 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 ITLN2Q8WWU7 325 aaPredicted RBP7.92□□□□□ -1.14
SF3B1-211ENST00000487698 MOB3AQ96BX8 217 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 CABLES2Q9BTV7 478 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 TMPRSS13Q9BYE2 586 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 DLL4Q9NR61 685 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 MBNL3Q9NUK0 354 aaKnown RBP7.92□□□□□ -1.14
SF3B1-211ENST00000487698 RNF7Q9UBF6 113 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 SLC23A1Q9UHI7 598 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 METRNQ9UJH8 293 aa7.92□□□□□ -1.14
SF3B1-211ENST00000487698 G3V3Q6 166 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 TUSC2O75896 110 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 OR2A4O95047 310 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 DUS4LO95620 317 aaKnown RBP7.91□□□□□ -1.14
SF3B1-211ENST00000487698 CTSDP07339 412 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-211ENST00000487698 APOBEC3AP31941 199 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-211ENST00000487698 GLP1RP43220 463 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 GZMKP49863 264 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 UCP3P55916 312 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
SF3B1-211ENST00000487698 COL10A1Q03692 680 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 TESK1Q15569 626 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 MST1LQ2TV78 715 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 FAM209AQ5JX71 171 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 SLC35E4Q6ICL7 350 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 NLRC3Q7RTR2 1065 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 OR4A4PQ8NGN8 299 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 COQ2Q96H96 371 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 OR2A7Q96R45 310 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 SHARPINQ9H0F6 387 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 PIPOXQ9P0Z9 390 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 MGAT4AQ9UM21 535 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 HRNRQ86YZ3 2850 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-211ENST00000487698 TMEM30CPA0ZSE6 113 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 NPIPB11E5RHQ5 1161 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 SMLR1H3BR10 107 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 ZG16O60844 167 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 CLDN14O95500 239 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 PPYP01298 95 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 GIPP09681 153 aaPredicted RBP7.91□□□□□ -1.14
SF3B1-211ENST00000487698 CTXN2P0C2S0 81 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 TNFRSF1AP19438 455 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 AADACP22760 399 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 PRDX2P32119 198 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 H2BFSP57053 126 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 IL13RA1P78552 427 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 CCL8P80075 99 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 HMGN3Q15651 99 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 OR5T2Q8NGG2 359 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 ANGPTL6Q8NI99 470 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 DNAJB11Q9UBS4 358 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 PCDHB10Q9UN67 800 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 PPP1R3CQ9UQK1 317 aa7.91□□□□□ -1.14
SF3B1-211ENST00000487698 TRBV6-7A0A0A0MS04 114 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 DBX1A6NMT0 343 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 B9A039 149 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 SFT2D2O95562 160 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 DIRAS3O95661 229 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 TK1P04183 234 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF728P0DKX0 622 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 PGAM2P15259 253 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 HLA-GP17693 338 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 NFYAP23511 347 aaPredicted RBP7.9□□□□□ -1.14
SF3B1-211ENST00000487698 VAMP1P23763 118 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 CD34P28906 385 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 CD80P33681 288 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 SEC61A1P61619 476 aaKnown RBP7.9□□□□□ -1.14
SF3B1-211ENST00000487698 ZNF672Q499Z4 452 aaPredicted RBP7.9□□□□□ -1.14
SF3B1-211ENST00000487698 LY6G6FQ5SQ64 297 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 ZCCHC24Q8N2G6 241 aaKnown RBP7.9□□□□□ -1.14
SF3B1-211ENST00000487698 BOLLQ8N9W6 283 aaKnown RBP7.9□□□□□ -1.14
SF3B1-211ENST00000487698 OR11L1Q8NGX0 322 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 ZFAND1Q8TCF1 268 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 CNTNAP3BQ96NU0 1288 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 CNTNAP3Q9BZ76 1288 aa7.9□□□□□ -1.14
SF3B1-211ENST00000487698 CISD1Q9NZ45 108 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms