RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 MITFO75030 526 aaPredicted RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 S1PR2O95136 353 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 TTRP02766 147 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 GAPDHP04406 335 aaKnown RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 H1F0P07305 194 aaKnown RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 OR5H8P0DN80 308 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 PRKACAP17612 351 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 ATF4P18848 351 aaPredicted RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 CD1BP29016 333 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 BMI1P35226 326 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 GLP1RP43220 463 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 KIR2DS2P43631 304 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 GSSP48637 474 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 GYS2P54840 703 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 TPPP2P59282 170 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 RIPPLY1Q0D2K3 151 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 ZNF146Q15072 292 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 GUCA2BQ16661 112 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 DEFB114Q30KQ6 69 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 KRBOX4Q5JUW0 171 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 RRM2BQ7LG56 351 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 YIPF7Q8N8F6 280 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 OR2T4Q8NH00 348 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 MRGPRDQ8TDS7 321 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 THEM6Q8WUY1 208 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 INTS14Q96SY0 518 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 PBOV1Q9GZY1 135 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 PCDHB16Q9NRJ7 776 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 CNOT2Q9NZN8 540 aaKnown RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 NDUFAF4Q9P032 175 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 MDFICQ9P1T7 246 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 CD300AQ9UGN4 299 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 KIF25Q9UIL4 384 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 GSTK1Q9Y2Q3 226 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 AMMECR1Q9Y4X0 333 aaPredicted RBP4.29□□□□□ -1.72
COL4A3-206ENST00000487633 ENPP4Q9Y6X5 453 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 V9GYS6 101 aa4.29□□□□□ -1.72
COL4A3-206ENST00000487633 IGHV4-4A0A075B6R2 117 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 A0A1W2PRQ8 180 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 FAM220BPB1ANY3 271 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 ANGPT2O15123 496 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 NDUFB8O95169 186 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 ZNF682O95780 498 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 HLA-DRB1P01911 266 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 NCK1P16333 377 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 MFAP2P55001 183 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 KRTAP10-2P60368 255 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 ACTBP60709 375 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 GNGT1P63211 74 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 SCN1BQ07699 218 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 DGCR6Q14129 220 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 CDK5R1Q15078 307 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 RBMS2Q15434 407 aaKnown RBP4.28□□□□□ -1.72
COL4A3-206ENST00000487633 MMDQ15546 238 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 SNCBQ16143 134 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 IFI44LQ53G44 452 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 CLVS2Q5SYC1 327 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 METTL21CQ5VZV1 264 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 COMMD2Q86X83 199 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 FAM58AQ8N1B3 248 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 LFNGQ8NES3 379 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 OR10X1Q8NGY0 326 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 HAVCR2Q8TDQ0 301 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 RCN3Q96D15 328 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 C7orf34Q96L11 122 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 ELAC2Q9BQ52 826 aaKnown RBP4.28□□□□□ -1.72
COL4A3-206ENST00000487633 CCDC134Q9H6E4 229 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 SLC25A19Q9HC21 320 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 MBNL3Q9NUK0 354 aaKnown RBP4.28□□□□□ -1.72
COL4A3-206ENST00000487633 MRGBPQ9NV56 204 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 CMTM6Q9NX76 183 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 SLC2A8Q9NY64 477 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 UBQLN2Q9UHD9 624 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 ENPP5Q9UJA9 477 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 COPS3Q9UNS2 423 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 FOXA2Q9Y261 457 aaPredicted RBP4.28□□□□□ -1.72
COL4A3-206ENST00000487633 CDH10Q9Y6N8 788 aa4.28□□□□□ -1.72
COL4A3-206ENST00000487633 IGKV1-9A0A0C4DH69 117 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 TRBV2A0A0J9YWF9 115 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 A0A0U1RQV5 110 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 CCDC22O60826 627 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 DHRS3O75911 302 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 IL1AP01583 271 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 TRGV3P03979 118 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 LYNP07948 512 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 RPL35AP18077 110 aaKnown RBP4.27□□□□□ -1.73
COL4A3-206ENST00000487633 RHCEP18577 417 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 GSTT1P30711 240 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 CRIP2P52943 208 aaPredicted RBP4.27□□□□□ -1.73
COL4A3-206ENST00000487633 CX3CL1P78423 397 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 SSBP2P81877 361 aaPredicted RBP4.27□□□□□ -1.73
COL4A3-206ENST00000487633 LSAMPQ13449 338 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 APOFQ13790 326 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 MAPRE2Q15555 327 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 ZNF124Q15973 351 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 ODF4Q2M2E3 257 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 LGALS9BQ3B8N2 356 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 Q5VSD8 79 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms