RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PLGLAQ15195 96 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 TUSC1Q2TAM9 212 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 IGSF11Q5DX21 431 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 ZNF787Q6DD87 383 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 HIST2H3AQ71DI3 136 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 FAM214BQ7L5A3 538 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 SLC39A7Q92504 469 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 BOD1Q96IK1 185 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 S1PR3Q99500 378 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 TM2D1Q9BX74 207 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 NKX2-6A6NCS4 301 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 TRIM77I1YAP6 450 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 ADAM10O14672 748 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 SHOXO15266 292 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 NKX2-8O15522 239 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 CELA3AP09093 270 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 CTSSP25774 331 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 LPAR6P43657 344 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 RXFP4Q8TDU9 374 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 ABHD5Q8WTS1 349 aa10.21□□□□□ -0.77
TRA2B-214ENST00000487615 hCG_38984A0A1B0GV85 526 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 C1orf87Q8N0U7 546 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 PAQR4Q8N4S7 273 aaPredicted RBP10.21□□□□□ -0.78
TRA2B-214ENST00000487615 CISD2Q8N5K1 135 aaKnown RBP10.21□□□□□ -0.78
TRA2B-214ENST00000487615 TMEM105Q8N8V8 129 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 MRGPRDQ8TDS7 321 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 PINX1Q96BK5 328 aaKnown RBP10.21□□□□□ -0.78
TRA2B-214ENST00000487615 MALSU1Q96EH3 234 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 OR10C1Q96KK4 312 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 OR2D2Q9H210 308 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 UQCC1Q9NVA1 299 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 MRPS18CQ9Y3D5 142 aaKnown RBP10.21□□□□□ -0.78
TRA2B-214ENST00000487615 IGKV1-9A0A0C4DH69 117 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 MEX3AA1L020 520 aaKnown RBP10.21□□□□□ -0.78
TRA2B-214ENST00000487615 CRYM-AS1A6NIL9 109 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 HAND1O96004 215 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 EIF2S3LQ2VIR3 472 aaKnown RBP10.21□□□□□ -0.78
TRA2B-214ENST00000487615 STPG1Q5TH74 334 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 FAM166AQ6J272 317 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 CPEB3Q8NE35 698 aaKnown RBP10.21□□□□□ -0.78
TRA2B-214ENST00000487615 PLPPR2Q96GM1 343 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 TCEAL7Q9BRU2 100 aa10.21□□□□□ -0.78
TRA2B-214ENST00000487615 KIAA1549LQ6ZVL6 1849 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 BMP5P22003 454 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 PMELP40967 661 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 TRAT1Q6PIZ9 186 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 MOB3AQ96BX8 217 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 FAM117AQ9C073 453 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 ARV1Q9H2C2 271 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 NDRG3Q9UGV2 375 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 POMT1Q9Y6A1 747 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 TRAV39A0A0B4J263 110 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 AGFG2O95081 481 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 NAT2P11245 290 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 KLF3P57682 345 aaPredicted RBP10.2□□□□□ -0.78
TRA2B-214ENST00000487615 ZNF528Q3MIS6 628 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 ATP1A1-AS1Q5TC04 95 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 OR1K1Q8NGR3 316 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 NANPQ8TBE9 248 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 APOA2P02652 100 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 TMEM267Q0VDI3 215 aaPredicted RBP10.2□□□□□ -0.78
TRA2B-214ENST00000487615 IGFBP7Q16270 282 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 NRN1LQ496H8 165 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 ABLIM2Q6H8Q1 611 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 BHLHA15Q7RTS1 189 aaPredicted RBP10.2□□□□□ -0.78
TRA2B-214ENST00000487615 PFDN5Q99471 154 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.2□□□□□ -0.78
TRA2B-214ENST00000487615 PSG11Q9UQ72 335 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 AMDHD2Q9Y303 409 aa10.2□□□□□ -0.78
TRA2B-214ENST00000487615 TRGV10A0A0A0MS01 117 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 SYNGR1O43759 233 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 OR2C1O95371 312 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 MBP02144 154 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 NPBWR2P48146 333 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 IL24Q13007 206 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 HIST2H3PS2Q5TEC6 136 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 ASPHD2Q6ICH7 369 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 SAXO1Q8IYX7 474 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 ZNF524Q96C55 264 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 TMEM210A6NLX4 147 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 C9orf172C9J069 976 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 M0R1X1 148 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 CHST1O43916 411 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 SCAF4O95104 1147 aaKnown RBP10.19□□□□□ -0.78
TRA2B-214ENST00000487615 COX5AP20674 150 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 ADIRFQ15847 76 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 OSGIN2Q9Y236 505 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 URGCP-MRPS24S4R325 110 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 A0A0U1RQK1 487 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 DUXBA0A1W2PPF3 345 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 A8MXE2 369 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 SCTP09683 121 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 METTL15P1P0C7V9 234 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 EWSR1Q01844 656 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRA2B-214ENST00000487615 GABRA6Q16445 453 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 GFRALQ6UXV0 394 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 BMPERQ8N8U9 685 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 SCCPDHQ8NBX0 429 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 ADAMTS17Q8TE56 1095 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 S100PBPQ96BU1 408 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms