RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 FAM90A7PA6NKC0 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 GJE1A6NN92 205 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A22PA8MWA6 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A12PA8MX19 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A5PA8MXJ8 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A23PA8MXZ1 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 B4DEV8 164 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF587BE7ETH6 402 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 DNPH1O43598 174 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 NXPH3O95157 252 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 F10P00742 488 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 SCTP09683 121 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A15PP0C7V4 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A13PP0C7W8 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A14PP0C7W9 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A24PP0C7X0 464 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 IGKV1-13P0DP09 117 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 RAC3P60763 192 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 ALKBH3Q96Q83 286 aaPredicted RBP10.48□□□□□ -0.73
COL3A1-206ENST00000487010 SH2D2AQ9NP31 389 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 ELOA3CA0A087WX78 387 aaPredicted RBP10.48□□□□□ -0.73
COL3A1-206ENST00000487010 SLC33A1O00400 549 aaPredicted RBP10.48□□□□□ -0.73
COL3A1-206ENST00000487010 PPP1R2P9O14990 202 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 ATXN7O15265 892 aaPredicted RBP10.48□□□□□ -0.73
COL3A1-206ENST00000487010 NDUFS6O75380 124 aaKnown RBP10.48□□□□□ -0.73
COL3A1-206ENST00000487010 CBR3O75828 277 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 TUSC2O75896 110 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 NAPSAO96009 420 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 SOD3P08294 240 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 EDN3P14138 238 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 HAAOP46952 286 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 SSR4P51571 173 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 NKX6-1P78426 367 aaPredicted RBP10.48□□□□□ -0.73
COL3A1-206ENST00000487010 OR8G1Q15617 311 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 AAED1Q7RTV5 226 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 P4HA3Q7Z4N8 544 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 HIST3H2BBQ8N257 126 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 OR5D13Q8NGL4 314 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 IMMP1LQ96LU5 166 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 FOXB1Q99853 325 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 WDR54Q9H977 334 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 CCL28Q9NRJ3 127 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 TAAR3PQ9P1P4 343 aa10.48□□□□□ -0.73
COL3A1-206ENST00000487010 MYO15AQ9UKN7 3530 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 TRIOO75962 3097 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF716A6NP11 495 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 BCL3P20749 454 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 GPX4P36969 197 aaPredicted RBP10.47□□□□□ -0.73
COL3A1-206ENST00000487010 CD200P41217 278 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 CLDN15P56746 228 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 PCBD1P61457 104 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 DEFA6Q01524 100 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 HERPUD1Q15011 391 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 ZNF468Q5VIY5 522 aaPredicted RBP10.47□□□□□ -0.73
COL3A1-206ENST00000487010 GFI1BQ5VTD9 330 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 THNSL2Q86YJ6 484 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 IL22RA2Q969J5 263 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 SPSB4Q96A44 273 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 GPR61Q9BZJ8 451 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 PRDM13Q9H4Q3 707 aa10.47□□□□□ -0.73
COL3A1-206ENST00000487010 LY6G6EA0A0G2JKS1 128 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 H0Y980 276 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 DFFBO76075 338 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 TRGC1P0CF51 173 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 COX6A1P12074 109 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 HIST1H1BP16401 226 aaKnown RBP10.46□□□□□ -0.73
COL3A1-206ENST00000487010 CARD18P57730 90 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 B3GALT5-AS1P59052 145 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 CEACAM16Q2WEN9 425 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 FAM90A2PQ658T7 463 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 OR2T2Q6IF00 324 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 ABHD5Q8WTS1 349 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 OCIAD1Q9NX40 245 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 GNG13Q9P2W3 67 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 U3KQA8 63 aa10.46□□□□□ -0.73
COL3A1-206ENST00000487010 PTBP3O95758 552 aaKnown RBP10.46□□□□□ -0.74
COL3A1-206ENST00000487010 UMODP07911 640 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 RND2P52198 227 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 RPS18P62269 152 aaKnown RBP10.46□□□□□ -0.74
COL3A1-206ENST00000487010 RNPS1Q15287 305 aaKnown RBP10.46□□□□□ -0.74
COL3A1-206ENST00000487010 DNLZQ5SXM8 178 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 STX12Q86Y82 276 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 H1FOOQ8IZA3 346 aaPredicted RBP10.46□□□□□ -0.74
COL3A1-206ENST00000487010 M1APQ8TC57 530 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 FRZBQ92765 325 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 C1QTNF5Q9BXJ0 243 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 TMEM242Q9NWH2 141 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 GFOD1Q9NXC2 390 aa10.46□□□□□ -0.74
COL3A1-206ENST00000487010 CISD1Q9NZ45 108 aaKnown RBP10.46□□□□□ -0.74
COL3A1-206ENST00000487010 IGKV1-6A0A0C4DH72 117 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 KIR2DS1A0A191URI9 304 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 PGLYRP1O75594 196 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 IFNA5P01569 189 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 KLK3P07288 261 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-206ENST00000487010 CTXN2P0C2S0 81 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 KIR2DS4P43632 304 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 FGF12P61328 243 aa10.45□□□□□ -0.74
COL3A1-206ENST00000487010 RAB11AP62491 216 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms