RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ELL3Q9HB65 397 aaPredicted RBP3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 CMC2Q9NRP2 79 aa3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 C19orf12Q9NSK7 152 aa3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 ARGLU1Q9NWB6 273 aaPredicted RBP3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 FAM118AQ9NWS6 357 aa3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 USE1Q9NZ43 259 aa3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 DNAJC27Q9NZQ0 273 aa3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 PITPNC1Q9UKF7 332 aa3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 TBL2Q9Y4P3 447 aaKnown RBP3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 V9GYQ6 96 aa3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
SNRNP40-205ENST00000486941 DNAH3Q8TD57 4116 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 IGLV5-45A0A087WSX0 123 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 A0A0U1RQV5 110 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 RFPL4AA6NLU0 287 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 C17orf98A8MV24 154 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 ODF3BA8MYP8 253 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 TEX22C9J3V5 150 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 RFPL4AL1F8VTS6 287 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 K7EIL1 84 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 SLC1A7O00341 560 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 ARPC2O15144 300 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 NOS1APO75052 506 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 DUS4LO95620 317 aaKnown RBP3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 RBP4P02753 201 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 LYNP07948 512 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 IGLL1P15814 213 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 H2AFXP16104 143 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 COX7A1P24310 79 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 PAX6P26367 422 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 PRDX2P32119 198 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 MAGEA2P43356 314 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 HOXA1P49639 335 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 RAB13P51153 203 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 CAPZA1P52907 286 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 DLX6P56179 175 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 BLCAPP62952 87 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 RIPPLY1Q0D2K3 151 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 TMEM187Q14656 261 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 SSX2Q16385 188 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 MICAQ29983 383 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 SMIM21Q3B7S5 101 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 DEFB121Q5J5C9 76 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 LCN1P1Q5VSP4 162 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 LCN8Q6JVE9 175 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 KCTD18Q6PI47 426 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 HAGHLQ6PII5 290 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 DEGS2Q6QHC5 323 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 ACP7Q6ZNF0 438 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 LHFPL4Q7Z7J7 247 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 TRPT1Q86TN4 253 aaKnown RBP3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 HAPLN4Q86UW8 402 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 PGAM4Q8N0Y7 254 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 DYNAPQ8N1N2 210 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 CD177Q8N6Q3 437 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 AQP11Q8NBQ7 271 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 OR5AU1Q8NGC0 362 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 OR11H6Q8NGC7 330 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 OR8B12Q8NGG6 310 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 OR13D1Q8NGV5 346 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 OTOSQ8NHW6 89 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 FAM81AQ8TBF8 368 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 RPS4Y2Q8TD47 263 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 THEM6Q8WUY1 208 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 CDRT15Q96T59 188 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 C1orf21Q9H246 121 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 RPS10P5Q9NQ39 176 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 ABCB10Q9NRK6 738 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 ARMC1Q9NVT9 282 aa3.13□□□□□ -1.91
SNRNP40-205ENST00000486941 TMEM269A0A1B0GVZ9 245 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 FAM183AA6NL82 134 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 J3QT63 122 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 K7N7A8 449 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 SYNGR1O43759 233 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 CIDEAO60543 219 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 SELENOFO60613 162 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF254O75437 659 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 E2F6O75461 281 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 NXPH2O95156 264 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 SOX14O95416 240 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 NRASP01111 189 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 IGLV3-1P01715 115 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ARG1P05089 322 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 HMGN1P05114 100 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 PGA5P0DJD9 388 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ZNF728P0DKX0 622 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 IGHV1-8P0DP01 117 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 CCL3L1P16619 93 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 ALOX5APP20292 161 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MPZP25189 248 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 AZGP1P25311 298 aaKnown RBP3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 VDAC2P45880 294 aaPredicted RBP3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 HAAOP46952 286 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 OR12D2P58182 307 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 SLC35A2P78381 396 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 EFNB1P98172 346 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 MEF2CQ06413 473 aaPredicted RBP3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 EGFEM1PQ0D2K5 195 aa3.12□□□□□ -1.91
SNRNP40-205ENST00000486941 PPP1R8Q12972 351 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms