RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 KIR2DS4P43632 304 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 OR3A3P47888 321 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 CEBPDP49716 269 aaPredicted RBP5.8□□□□□ -1.48
UBR4-214ENST00000486515 RPL31P62899 125 aaKnown RBP5.8□□□□□ -1.48
UBR4-214ENST00000486515 MADCAM1Q13477 382 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 KIR2DS1Q14954 304 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 ATXN7L3Q14CW9 347 aaPredicted RBP5.8□□□□□ -1.48
UBR4-214ENST00000486515 CHRFAM7AQ494W8 412 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 SLC35E4Q6ICL7 350 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 BRICD5Q6PL45 260 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 CRIP3Q6Q6R5 217 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 TMEM17Q86X19 198 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 FAM185AQ8N0U4 392 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 Q8N402 240 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 FAM216BQ8N7L0 139 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 GDPD1Q8N9F7 314 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 IGFBPL1Q8WX77 278 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 SEH1LQ96EE3 360 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 C18orf12Q96KH6 178 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 Q96MF0 132 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 GAFA1Q96PS6 74 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 ST6GALNAC5Q9BVH7 336 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 AUNIPQ9H7T9 357 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 PATZ1Q9HBE1 687 aaKnown RBP5.8□□□□□ -1.48
UBR4-214ENST00000486515 ZNF286AQ9HBT8 521 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 IL36RNQ9UBH0 155 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 VPS13CQ709C8 3753 aa5.8□□□□□ -1.48
UBR4-214ENST00000486515 LOC105371242A0A075B767 164 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 TRAV24A0A0B4J272 114 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 PPIAL4CA0A0B4J2A2 164 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 A0A0G2JMP0 313 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 A0A0X1KG70 313 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 HSPA12AO43301 675 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 ENSAO43768 121 aaKnown RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 WNT2P09544 360 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 CTXN2P0C2S0 81 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 PPIAL4GP0DN37 164 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 AMY2BP19961 511 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 DTYMKP23919 212 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 CD40LGP29965 261 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 ERP29P30040 261 aaKnown RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 IL2RGP31785 369 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 ETV6P41212 452 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 PPP5CP53041 499 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 P2RX3P56373 397 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 TAS2R46P59540 309 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 DEFA1P59665 94 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 DEFA3P59666 94 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 TSPAN5P62079 268 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 SSBP1Q04837 148 aaKnown RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 MEF2CQ06413 473 aaPredicted RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 AESQ08117 197 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 MOGAT2Q3SYC2 334 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 ZNF260Q3ZCT1 412 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 ACTBL2Q562R1 376 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 RNASE12Q5GAN4 147 aaKnown RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 ZNF57Q68EA5 555 aaPredicted RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 Q6P435 159 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 CCDC190Q86UF4 302 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 PRR18Q8N4B5 295 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 TOMM5Q8N4H5 51 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 OR4M2Q8NGB6 313 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 OR4K15Q8NH41 348 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 CLDND2Q8NHS1 167 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 CCDC107Q8WV48 283 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 GALMQ96C23 342 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 COX4I2Q96KJ9 171 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 SULT4A1Q9BR01 284 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 THAP7Q9BT49 309 aaPredicted RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 CCDC32Q9BV29 185 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 REG4Q9BYZ8 158 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 MIXL1Q9H2W2 232 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.79□□□□□ -1.48
UBR4-214ENST00000486515 DCAF16Q9NXF7 216 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 RCC2Q9P258 522 aaKnown RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 ZMAT5Q9UDW3 170 aaKnown RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 AK3Q9UIJ7 227 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 RBM7Q9Y580 266 aaKnown RBP5.79□□□□□ -1.48
UBR4-214ENST00000486515 MAB21L2Q9Y586 359 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 RYR3Q15413 4870 aa5.79□□□□□ -1.48
UBR4-214ENST00000486515 IGHV4-30-2A0A087WSY4 118 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 A0A0A6YYD4 124 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 ODAMA1E959 279 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 MEIS3P1A6NDR6 274 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 B4DSR2 109 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 ZNF736B4DX44 427 aaPredicted RBP5.78□□□□□ -1.48
UBR4-214ENST00000486515 MFNGO00587 321 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 CTDSPLO15194 276 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 PSPNO60542 156 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 RGS11O94810 467 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 IGHV2-5P01817 119 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 MELTFP08582 738 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 S100GP29377 79 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 OR3A1P47881 315 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 GZMKP49863 264 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 TMEM50BP56557 158 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 TAS2R19P59542 299 aa5.78□□□□□ -1.48
UBR4-214ENST00000486515 SEC61A1P61619 476 aaKnown RBP5.78□□□□□ -1.48
UBR4-214ENST00000486515 HOXA4Q00056 320 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms