RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PLPPR1Q8TBJ4 325 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 COQ2Q96H96 371 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 WDFY2Q96P53 400 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 FAAP24Q9BTP7 215 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 BEX2Q9BXY8 128 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 TMPRSS13Q9BYE2 586 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 COMMD3Q9UBI1 195 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 KIF25Q9UIL4 384 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 TRAPPC2LQ9UL33 140 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 HSF4Q9ULV5 492 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 UBE2J1Q9Y385 318 aaPredicted RBP9.39□□□□□ -0.91
NUP50-216ENST00000486184 ZANQ9Y493 2812 aa9.39□□□□□ -0.91
NUP50-216ENST00000486184 A0A0A6YYD4 124 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 MEX3AA1L020 520 aaKnown RBP9.38□□□□□ -0.91
NUP50-216ENST00000486184 ZNF728P0DKX0 622 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 CCL3L1P16619 93 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 PAX5Q02548 391 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 DYNC1I2Q13409 638 aaKnown RBP9.38□□□□□ -0.91
NUP50-216ENST00000486184 ZNF273Q14593 569 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 SIGIRRQ6IA17 410 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 VMO1Q7Z5L0 202 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 OR5H6Q8NGV6 325 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 NANPQ8TBE9 248 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 DACT3Q96B18 629 aaPredicted RBP9.38□□□□□ -0.91
NUP50-216ENST00000486184 S100A16Q96FQ6 103 aaKnown RBP9.38□□□□□ -0.91
NUP50-216ENST00000486184 ARHGAP5-AS1Q96IT6 56 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 SULT4A1Q9BR01 284 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 PECRQ9BY49 303 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 NCOR1P1Q9H4R4 102 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 METTL8Q9H825 291 aaKnown RBP9.38□□□□□ -0.91
NUP50-216ENST00000486184 RAB9BQ9NP90 201 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 DIABLOQ9NR28 239 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 TAS2R3Q9NYW6 316 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 KCNIP1Q9NZI2 227 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 CCDC59Q9P031 241 aaKnown RBP9.38□□□□□ -0.91
NUP50-216ENST00000486184 CDC42EP3Q9UKI2 254 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 TLN2Q9Y4G6 2542 aa9.38□□□□□ -0.91
NUP50-216ENST00000486184 ZNF729A6NN14 1252 aaPredicted RBP9.37□□□□□ -0.91
NUP50-216ENST00000486184 INAFM1C9JVW0 142 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 ZNF701M0R085 212 aaPredicted RBP9.37□□□□□ -0.91
NUP50-216ENST00000486184 CD3GP09693 182 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 ERVFRD-1P60508 538 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 SCGB2A2Q13296 93 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 ARFRP1Q13795 201 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 CHRFAM7AQ494W8 412 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 C6orf183Q5T699 404 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 GPR157Q5UAW9 335 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 NCR3LG1Q68D85 454 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 TRAT1Q6PIZ9 186 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 ZNF497Q6ZNH5 498 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 C1orf122Q6ZSJ8 110 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 IL17RELQ6ZVW7 336 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 OR4K15Q8NH41 348 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 SETD6Q8TBK2 473 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 MRGPRDQ8TDS7 321 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 CCDC107Q8WV48 283 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 DYRK2Q92630 601 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 CMSS1Q9BQ75 279 aaKnown RBP9.37□□□□□ -0.91
NUP50-216ENST00000486184 SIRPDQ9H106 197 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 RIMS4Q9H426 269 aaPredicted RBP9.37□□□□□ -0.91
NUP50-216ENST00000486184 SIRT7Q9NRC8 400 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 CSPG4Q6UVK1 2322 aa9.37□□□□□ -0.91
NUP50-216ENST00000486184 HIVEP2P31629 2446 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 A0A0A6YYH2 397 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 TRAV40A0A0B4J280 105 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 A6NJ64 397 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 SERPINE3A8MV23 424 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 FAM25AB3EWG3 89 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 FAM25CB3EWG5 89 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 FAM25GB3EWG6 89 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 RAB27BO00194 218 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 RGS5O15539 181 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 CLPXO76031 633 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 RBP4P02753 201 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 MT-ND4P03905 459 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 HIST1H1DP16402 221 aaKnown RBP9.36□□□□□ -0.91
NUP50-216ENST00000486184 GNB3P16520 340 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 GZMHP20718 246 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 TALDO1P37837 337 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 MOGAT2Q3SYC2 334 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 MOB1BQ7L9L4 216 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 OR13A1Q8NGR1 328 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 DYNC2LI1Q8TCX1 351 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 CORO2AQ92828 525 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 LHX4Q969G2 390 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 UPRTQ96BW1 309 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 SLC25A38Q96DW6 304 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 CMTM3Q96MX0 182 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 RBM38Q9H0Z9 239 aaKnown RBP9.36□□□□□ -0.91
NUP50-216ENST00000486184 HEXA-AS1Q9H8Q6 139 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 C12orf4Q9NQ89 552 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 AK3Q9UIJ7 227 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 ADAM30Q9UKF2 790 aa9.36□□□□□ -0.91
NUP50-216ENST00000486184 TRAV18A0A075B6X5 111 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 TRAV39A0A0B4J263 110 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 DPPA5A6NC42 116 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 FOXI3A8MTJ6 420 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms