RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 OR5K1Q8NHB7 308 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 MFSD8Q8NHS3 518 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 NEIL3Q8TAT5 605 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 DOK4Q8TEW6 326 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 STMN2Q93045 179 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 KCNS3Q9BQ31 491 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 WFDC6Q9BQY6 131 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 ZNF407Q9C0G0 2248 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 RPS6KB2Q9UBS0 482 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 ZNF229Q9UJW7 825 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 TP53TG5Q9Y2B4 290 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 ZNF835Q9Y2P0 537 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 AK6Q9Y3D8 172 aaKnown RBP4.08□□□□□ -1.76
RTN4-214ENST00000486085 FAM32AQ9Y421 112 aaKnown RBP4.08□□□□□ -1.76
RTN4-214ENST00000486085 UGT2A1Q9Y4X1 527 aa4.08□□□□□ -1.76
RTN4-214ENST00000486085 TRAV36DV7A0A075B6V5 113 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 A0A0G2JMM0 328 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 A0A0G2JRQ6 117 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 LOC105371267A0A1B0GV96 52 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 A0A1W2PPB8 328 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 A0A1W2PRS3 328 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 PINLYPA6NC86 204 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 TMEM210A6NLX4 147 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 KIR3DP1A8MWS1 328 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 BCKDKO14874 412 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 ARPC3O15145 178 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 OR10H3O60404 316 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 EIF1BO60739 113 aaKnown RBP4.07□□□□□ -1.76
RTN4-214ENST00000486085 GADD45GO95257 159 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 TGM6O95932 706 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 CST1P01037 141 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 IGHMP01871 453 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 CRHP06850 196 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 CTRB1P17538 263 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 GSTM3P21266 225 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 OMPP47874 163 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 IDH2P48735 452 aaKnown RBP4.07□□□□□ -1.76
RTN4-214ENST00000486085 DNASE1L1P49184 302 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 LHX2P50458 406 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 DAP3P51398 398 aaKnown RBP4.07□□□□□ -1.76
RTN4-214ENST00000486085 BIDP55957 195 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 WNT4P56705 351 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 CLDN18P56856 261 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 TAS2R41P59536 307 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 ESRRGP62508 458 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 TSPAN31Q12999 210 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 PSG7Q13046 419 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 MAB21L1Q13394 359 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 GUSBP1Q15486 140 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 ZNF829Q3KNS6 432 aaPredicted RBP4.07□□□□□ -1.76
RTN4-214ENST00000486085 THEM4Q5T1C6 240 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 TTC23Q5W5X9 447 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 CTRB2Q6GPI1 263 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 TMPPEQ6ZT21 453 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 RASSF6Q6ZTQ3 369 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 OLIG3Q7RTU3 272 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 GALNT10Q86SR1 603 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 RBM45Q8IUH3 476 aaKnown RBP4.07□□□□□ -1.76
RTN4-214ENST00000486085 FAM83FQ8NEG4 500 aaPredicted RBP4.07□□□□□ -1.76
RTN4-214ENST00000486085 ZNF680Q8NEM1 530 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 TMEM239Q8WW34 195 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 CPNE4Q96A23 557 aaPredicted RBP4.07□□□□□ -1.76
RTN4-214ENST00000486085 DDIT4LQ96D03 193 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 ZFP3Q96NJ6 502 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 GABARAPL3Q9BY60 117 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 DSN1Q9H410 356 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 REEP1Q9H902 201 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 RAB18Q9NP72 206 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 RPH3ALQ9UNE2 315 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 RASD1Q9Y272 281 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 ZNF462Q96JM2 2506 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 SHANK1Q9Y566 2161 aa4.07□□□□□ -1.76
RTN4-214ENST00000486085 HIVEP3Q5T1R4 2406 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 MPDZO75970 2070 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 TMED7-TICAM2A0A0A6YYA0 188 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 LRP5LA4QPB2 252 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 K7EM74 188 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 WRBO00258 174 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 TNFRSF11BO00300 401 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 CCNB2O95067 398 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 ATP6V1G2O95670 118 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 BGLAPP02818 100 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 GKN3PP0CG01 181 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 RBMY1CP0DJD4 496 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 GABRA1P14867 456 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 CXCR1P25024 350 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 CD1BP29016 333 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 OR1E2P47887 323 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 RFX3P48380 749 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 HNRNPA3P51991 378 aaKnown RBP4.06□□□□□ -1.76
RTN4-214ENST00000486085 ZNF133P52736 654 aaPredicted RBP4.06□□□□□ -1.76
RTN4-214ENST00000486085 UGT2B15P54855 530 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 APOC4P55056 127 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 PRPS1P60891 318 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 RAB14P61106 215 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 FOXF1Q12946 379 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 ARL6IP1Q15041 203 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 TOMM34Q15785 309 aaPredicted RBP4.06□□□□□ -1.76
RTN4-214ENST00000486085 C1orf140Q5VVS0 124 aa4.06□□□□□ -1.76
RTN4-214ENST00000486085 HDDC2Q7Z4H3 204 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms