RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 GMPPAQ96IJ6 420 aaPredicted RBP3.75□□□□□ -1.81
RTN4-213ENST00000485749 SEC22AQ96IW7 307 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 SLC25A33Q9BSK2 321 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 SMIM3Q9BZL3 60 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 C20orf27Q9GZN8 174 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 SHARPINQ9H0F6 387 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 CST9LQ9H4G1 147 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 METTL17Q9H7H0 456 aaPredicted RBP3.75□□□□□ -1.81
RTN4-213ENST00000485749 TAF9BQ9HBM6 251 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 APOBEC3GQ9HC16 384 aaKnown RBP3.75□□□□□ -1.81
RTN4-213ENST00000485749 MRPL16Q9NX20 251 aaKnown RBP3.75□□□□□ -1.81
RTN4-213ENST00000485749 C19orf25Q9UFG5 118 aaPredicted RBP3.75□□□□□ -1.81
RTN4-213ENST00000485749 HDGFL3Q9Y3E1 203 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 HSPE1-MOB4S4R3N1 261 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 V9GYS6 101 aa3.75□□□□□ -1.81
RTN4-213ENST00000485749 COL11A2P13942 1736 aaPredicted RBP3.75□□□□□ -1.81
RTN4-213ENST00000485749 MYO5AQ9Y4I1 1855 aaKnown RBP3.75□□□□□ -1.81
RTN4-213ENST00000485749 AFDNP55196 1824 aaKnown RBP3.74□□□□□ -1.81
RTN4-213ENST00000485749 LRP5O75197 1615 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SMIM35A0A1B0GVV1 85 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 hDV102S1A0JD36 115 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 C15orf61A6NNL5 157 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 C1orf196B1AJZ1 125 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 C2CD4DB7Z1M9 353 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 INMT-MINDY4F8WBC2 141 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SMKR1H3BMG3 65 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 H7C1C5 153 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 MRPS12O15235 138 aaKnown RBP3.74□□□□□ -1.81
RTN4-213ENST00000485749 SPRY3O43610 288 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 YIF1AO95070 293 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 TFAP2AP05549 437 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SLC2A2P11168 524 aaPredicted RBP3.74□□□□□ -1.81
RTN4-213ENST00000485749 GP1BBP13224 206 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 IL1RNP18510 177 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ZBTB25P24278 435 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 NPY1RP25929 384 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 APLNRP35414 380 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SUB1P53999 127 aaKnown RBP eCLIP3.74□□□□□ -1.811e-15■□□□□ 9.4
RTN4-213ENST00000485749 PFN3P60673 137 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 LCN6P62502 163 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 TJP1Q07157 1748 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ZNF763Q0D2J5 394 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 FASTKQ14296 549 aaKnown RBP3.74□□□□□ -1.81
RTN4-213ENST00000485749 RBM39Q14498 530 aaKnown RBP3.74□□□□□ -1.81
RTN4-213ENST00000485749 BATFQ16520 125 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 LRRC26Q2I0M4 334 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ZFP69Q49AA0 526 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SCGB2B2Q4G0G5 96 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 PAPPA-AS1Q5QFB9 102 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 NCMAPQ5T1S8 102 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 AVPI1Q5T686 147 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 C10orf25Q5T742 122 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 OR4C11Q6IEV9 310 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 EPGNQ6UW88 154 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 RNF165Q6ZSG1 346 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 C10orf71Q711Q0 1435 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 HSD17B13Q7Z5P4 300 aaPredicted RBP3.74□□□□□ -1.81
RTN4-213ENST00000485749 NAA40Q86UY6 237 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 OOSP2Q86WS3 158 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 PRR22Q8IZ63 422 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 TMEM86BQ8N661 226 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 TCEANCQ8N8B7 351 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 C8orf46Q8TAG6 207 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SLC7A6Q92536 515 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ARPC1AQ92747 370 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 COL21A1Q96P44 957 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ZNF670Q9BS34 389 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 PSMG3Q9BT73 122 aaPredicted RBP3.74□□□□□ -1.81
RTN4-213ENST00000485749 EBPLQ9BY08 206 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 MROQ9BYG7 248 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 LPAR5Q9H1C0 372 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SH3BGRL3Q9H299 93 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 VSIRQ9H7M9 311 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 PTGES2Q9H7Z7 377 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SH2D2AQ9NP31 389 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 MMP26Q9NRE1 261 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ACER3Q9NUN7 267 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 C14orf105Q9NVL8 296 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 DNAJC27Q9NZQ0 273 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 PCYOX1Q9UHG3 505 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ERG28Q9UKR5 140 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 PRNDQ9UKY0 176 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 BTRCQ9Y297 605 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 OR51B2Q9Y5P1 312 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 HS3ST3B1Q9Y662 390 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 RREB1Q92766 1687 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 KCPQ6ZWJ8 1503 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 ROBO3Q96MS0 1386 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 SCN11AQ9UI33 1791 aa3.74□□□□□ -1.81
RTN4-213ENST00000485749 NUP188Q5SRE5 1749 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 PKD1L3Q7Z443 1732 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 DUOX1Q9NRD9 1551 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TRAV36DV7A0A075B6V5 113 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TRAV30A0A087WSZ9 112 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 IGHV2OR16-5A0A0B4J2B6 119 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 TMEM272A0A1B0GTI8 110 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 A0A1B0GX51 115 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 GFYI3L273 518 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 ZNHIT1O43257 154 aa3.73□□□□□ -1.81
RTN4-213ENST00000485749 GCM2O75603 506 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms