RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 MS4A15Q8N5U1 240 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 NANOGP1Q8N7R0 232 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 CPNE2Q96FN4 548 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-227ENST00000485102 P2RX4Q99571 388 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 HMG20AQ9NP66 347 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 PCDHB16Q9NRJ7 776 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 AASSQ9UDR5 926 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 A0A087WXM4 84 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 SH2D1BO14796 132 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 FAM106CPP0CH98 169 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 BCL3P20749 454 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 PRKACBP22694 351 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 MAPK3P27361 379 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-227ENST00000485102 DUSP1P28562 367 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 MNDAP41218 407 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 GP2P55259 537 aaKnown RBP10.31□□□□□ -0.76
HDAC6-227ENST00000485102 PDZK1IP1Q13113 114 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 SPHARQ15513 63 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 TP53I3Q53FA7 332 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 PRAMEF5Q5TYX0 476 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 BAIAP2L2Q6UXY1 529 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 SSX6Q7RTT6 188 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 ZNF367Q7RTV3 350 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 COMMD1Q8N668 190 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 OR2G2Q8NGZ5 317 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 OR5AK2Q8NH90 309 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 CHPT1Q8WUD6 406 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 SMIM19Q96E16 107 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 PELI1Q96FA3 418 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 NCOR1P1Q9H4R4 102 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 ZNF286AQ9HBT8 521 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 MOB4Q9Y3A3 225 aa10.31□□□□□ -0.76
HDAC6-227ENST00000485102 IGKV1-9A0A0C4DH69 117 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 ODAMA1E959 279 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 TOR1AO14656 332 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 FGF16O43320 207 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 RAMP3O60896 148 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 INMTO95050 263 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 OR2H2O95918 312 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 CGB3P0DN86 165 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 CGB7P0DN87 165 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 PRKACAP17612 351 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 C21orf33P30042 268 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-227ENST00000485102 GDNFP39905 211 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 ETV1P50549 477 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 MTCP1P56278 107 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 MED22Q15528 200 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 YIF1BQ5BJH7 314 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 KHDC1LQ5JSQ8 128 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 LAIR2Q6ISS4 152 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 ZNF773Q6PK81 442 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 UNQ9370/PRO34162Q6UXP9 181 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 LHFPL2Q6ZUX7 228 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 OR2W3Q7Z3T1 314 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 PRSS35Q8N3Z0 413 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 CHST4Q8NCG5 386 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 UFD1Q92890 307 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 SPSB1Q96BD6 273 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 LINC00574Q9H8X3 128 aa10.3□□□□□ -0.76
HDAC6-227ENST00000485102 EXOSC4Q9NPD3 245 aaKnown RBP10.3□□□□□ -0.76
HDAC6-227ENST00000485102 SORL1Q92673 2214 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 LOC107986453A0A1B0GWG9 222 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 SH2D7A6NKC9 451 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-227ENST00000485102 ZNF729A6NN14 1252 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-227ENST00000485102 OGG1O15527 345 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 KDM4BO94953 1096 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 ZFPL1O95159 310 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 MT-ND2P03891 347 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 ATF1P18846 271 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 PTGFRP43088 359 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 OR3A4PP47883 348 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 GLIPR1P48060 266 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 DGCR2P98153 550 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 AESQ08117 197 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 MLLT11Q13015 90 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-227ENST00000485102 CDK5R1Q15078 307 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 ODF4Q2M2E3 257 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 C17orf58Q2M2W7 97 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 RNF144BQ7Z419 303 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 ZNF329Q86UD4 541 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 SAXO1Q8IYX7 474 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 OR4D6Q8NGJ1 314 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 OR9G1Q8NH87 305 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 GPR148Q8TDV2 347 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 PHYHIPQ92561 330 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 RNF166Q96A37 237 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-227ENST00000485102 ADAT3Q96EY9 351 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-227ENST00000485102 ZNF649Q9BS31 505 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 OR6C3Q9NZP0 311 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 CKLFQ9UBR5 152 aa10.29□□□□□ -0.76
HDAC6-227ENST00000485102 LSM4Q9Y4Z0 139 aaKnown RBP10.29□□□□□ -0.76
HDAC6-227ENST00000485102 IGKV1-12A0A0C4DH73 117 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 KBTBD11-OT1A0A1B0GTJ5 212 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 SIRPB1O00241 398 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 IGKV1D-12P01611 117 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 IGHG2P01859 326 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 OCM2P0CE71 109 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 OCMP0CE72 109 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-227ENST00000485102 ZNF20P17024 532 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 POU3F4P49335 361 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms