RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 MNDAP41218 407 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 PTGFRP43088 359 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 RANBP1P43487 201 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 CEBPDP49716 269 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-215ENST00000484203 BDH1Q02338 343 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 EMX1Q04741 257 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-215ENST00000484203 IL13RA2Q14627 380 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 RSU1Q15404 277 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 C19orf54Q5BKX5 351 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF691Q5VV52 312 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 SLC35E4Q6ICL7 350 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF782Q6ZMW2 699 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-215ENST00000484203 Q8N2B8 174 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 ABHD12Q8N2K0 398 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 OR10A7Q8NGE5 316 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 OR52I1Q8NGK6 324 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 OR52N1Q8NH53 320 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 NDNFQ8TB73 568 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 MRPS24Q96EL2 167 aaKnown RBP4.98□□□□□ -1.61
PTCD3-215ENST00000484203 GPER1Q99527 375 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 SPACA1Q9HBV2 294 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 BABAM2Q9NXR7 383 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 DPM3Q9P2X0 92 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 DIMT1Q9UNQ2 313 aaKnown RBP4.98□□□□□ -1.61
PTCD3-215ENST00000484203 TCF19Q9Y242 345 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 MYRFQ9Y2G1 1151 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 GSTK1Q9Y2Q3 226 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 AMMECR1Q9Y4X0 333 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-215ENST00000484203 VWFP04275 2813 aa4.98□□□□□ -1.61
PTCD3-215ENST00000484203 WNK1Q9H4A3 2382 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 A0A0G2JK05 382 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 KBTBD11-OT1A0A1B0GTJ5 212 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 F8VVB4 439 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 F8VWA3 439 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 H3BSH0 61 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 CSTBP04080 98 aaKnown RBP4.97□□□□□ -1.61
PTCD3-215ENST00000484203 TFF1P04155 84 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 CSF1P09603 554 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 FAM106CPP0CH98 169 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 GYPEP15421 78 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 GZMHP20718 246 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 MAPK3P27361 379 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-215ENST00000484203 CD34P28906 385 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 OR3A1P47881 315 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 NPBWR2P48146 333 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 EFNB2P52799 333 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 SLC34A1Q06495 639 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 RIPK1Q13546 671 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 CDK5R1Q15078 307 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 FAM189A2Q15884 450 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 SSX2Q16385 188 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 TMEM30BQ3MIR4 351 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 YIF1BQ5BJH7 314 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 NHLRC3Q5JS37 347 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 KRBOX4Q5JUW0 171 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF529Q6P280 563 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 CDH26Q8IXH8 852 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 DHRSXQ8N5I4 330 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 Q8NFD4 153 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 OR4S1Q8NGB4 309 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 OR52N4Q8NGI2 321 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 OR51A4Q8NGJ6 313 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 OR51T1Q8NGJ9 327 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 TNFAIP8L1Q8WVP5 186 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 TMEM106AQ96A25 262 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 SMIM19Q96E16 107 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 TMEM80Q96HE8 168 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 SLC29A1Q99808 456 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 PDCD1LG2Q9BQ51 273 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 CHST6Q9GZX3 395 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 METTL9Q9H1A3 318 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 LINC00574Q9H8X3 128 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 ISG20L2Q9H9L3 353 aaKnown RBP4.97□□□□□ -1.61
PTCD3-215ENST00000484203 AMBNQ9NP70 447 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 IL36GQ9NZH8 169 aa4.97□□□□□ -1.61
PTCD3-215ENST00000484203 CNOT2Q9NZN8 540 aaKnown RBP4.97□□□□□ -1.61
PTCD3-215ENST00000484203 MEIKINA0A087WXM9 373 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 A0A087X0M5 115 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 IGKV1-12A0A0C4DH73 117 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 A0A1B0GX30 115 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 A6NDX4 124 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 FAM90A22PA8MWA6 464 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 H0YJX3 145 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 SIRPB1O00241 398 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 SLC33A1O00400 549 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-215ENST00000484203 OGG1O15527 345 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 XPNPEP2O43895 674 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 CA11O75493 328 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 GPX5O75715 221 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 IGKV1D-12P01611 117 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 OPN1MWP04001 364 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 CD1AP06126 327 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 LIMS3P0CW19 117 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 LIMS4P0CW20 117 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 OPN1MW2P0DN77 364 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 OPN1MW3P0DN78 364 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 GTF2F2P13984 249 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 CDK2P24941 298 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 DUSP1P28562 367 aa4.96□□□□□ -1.62
PTCD3-215ENST00000484203 BDKRB2P30411 391 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms