RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, human

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTFDC1-208	ENST00000484084	NANOS3	P60323	173 aa	Known RBP	6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SCN1B	Q07699	218 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF616	Q08AN1	781 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	LTC4S	Q16873	150 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	FAM98B	Q52LJ0	330 aa	Known RBP	6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ACSM6	Q6P461	480 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	DHFR2	Q86XF0	187 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	CHST4	Q8NCG5	386 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OR51A4	Q8NGJ6	313 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OR5D18	Q8NGL1	313 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	HAVCR2	Q8TDQ0	301 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	PP6455	Q8WZ26	134 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	HRASLS5	Q96KN8	279 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OR5B12	Q96R08	314 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MBOAT4	Q96T53	435 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	GON7	Q9BXV9	100 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZMAT4	Q9H898	229 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	PLEKHA1	Q9HB21	404 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OR6C3	Q9NZP0	311 aa		6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	6.64	□□□□□ -1.35
RTFDC1-208	ENST00000484084	FUOM	A2VDF0	154 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	METTL15	A6NJ78	407 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF670-ZNF695	F2Z2N8	137 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	HSPB6	O14558	160 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OVOL1	O14753	267 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	DEGS1	O15121	323 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	LDLRAD4	O15165	306 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SLC31A2	O15432	143 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	CYB5A	P00167	134 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MT-ND2	P03891	347 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ISG15	P05161	165 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF44	P15621	663 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	DAP	P51397	102 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF134	P52741	427 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF85	Q03923	595 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	FAM27D1	Q5T7N8	215 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	VPS13D	Q5THJ4	4388 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	NXNL2	Q5VZ03	156 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	C12orf73	Q69YU5	71 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	FAHD1	Q6P587	224 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SLC16A12	Q6ZSM3	486 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MOB3B	Q86TA1	216 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	HAPLN4	Q86UW8	402 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SAXO1	Q8IYX7	474 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	LINC00311	Q8N616	119 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	YIPF7	Q8N8F6	280 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF565	Q8N9K5	539 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MINDY2	Q8NBR6	621 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF439	Q8NDP4	499 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OR10A7	Q8NGE5	316 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OR2T10	Q8NGZ9	312 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MRGPRD	Q8TDS7	321 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	CANT1	Q8WVQ1	401 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	FGGY	Q96C11	551 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ISOC1	Q96CN7	298 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	OPALIN	Q96PE5	141 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	TBX5	Q99593	518 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	THAP7	Q9BT49	309 aa	Predicted RBP	6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	FRRS1L	Q9P0K9	344 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	GLS2	Q9UI32	602 aa		6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF107	Q9UII5	783 aa	Predicted RBP	6.63	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ABCA13	Q86UQ4	5058 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MEIKIN	A0A087WXM9	373 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084		H0YJX3	145 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MPZL2	O60487	215 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MITF	O75030	526 aa	Predicted RBP	6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SAP30	O75446	220 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SULT1C4	O75897	302 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	APOL3	O95236	402 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MOS	P00540	346 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SERPINA3	P01011	423 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	GAPDH	P04406	335 aa	Known RBP	6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	CD1B	P29016	333 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	GLP1R	P43220	463 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	RAB9A	P51151	201 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZNF137P	P52743	207 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	HAGH	Q16775	308 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ELP2	Q6IA86	826 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	LINC00322	Q6ZN03	302 aa	Predicted RBP	6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	LHFPL2	Q6ZUX7	228 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	TCEANC	Q8N8B7	351 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	C8orf31	Q8N9H6	132 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	CCDC54	Q8NEL0	328 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	CNIH3	Q8TBE1	160 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	TMEM163	Q8TC26	289 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ARPC1A	Q92747	370 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	SPSB1	Q96BD6	273 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	CYYR1	Q96J86	154 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	NABP2	Q9BQ15	211 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	TOLLIP	Q9H0E2	274 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	RHOF	Q9HBH0	211 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	VSIG4	Q9Y279	399 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	MYRF	Q9Y2G1	1151 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	FBXO7	Q9Y3I1	522 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	WSB1	Q9Y6I7	421 aa		6.62	□□□□□ -1.35
RTFDC1-208	ENST00000484084	IGHV4OR15-8	A0A075B7B6	117 aa		6.61	□□□□□ -1.35
RTFDC1-208	ENST00000484084		A0A087WW49	117 aa		6.61	□□□□□ -1.35
RTFDC1-208	ENST00000484084	IGHV7-81	A0A0B4J1V7	117 aa		6.61	□□□□□ -1.35
RTFDC1-208	ENST00000484084	ZAR1L	A6NP61	321 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms