RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 DIRC2Q96SL1 478 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PHB2Q99623 299 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 VRK1Q99986 396 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 SEC22CQ9BRL7 303 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 RTBDNQ9BSG5 229 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 NCOR1P1Q9H4R4 102 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF442Q9H7R0 627 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF286AQ9HBT8 521 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 Q9N2K0 584 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 NGBQ9NPG2 151 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 CRIM1Q9NZV1 1036 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PIPOXQ9P0Z9 390 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 MGAT4CQ9UBM8 478 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF69Q9UC07 566 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF230Q9UIE0 474 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF222Q9UK12 451 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PAIP2BQ9ULR5 123 aaKnown RBP4.58□□□□□ -1.68
COL17A1-206ENST00000483876 PCDHB10Q9UN67 800 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 VSIG4Q9Y279 399 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 MEMO1Q9Y316 297 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
COL17A1-206ENST00000483876 IGKV1D-8A0A087WSZ0 117 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TRAV24A0A0B4J272 114 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 PIGBOS1A0A0B4J2F0 54 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 OR5H14A6NHG9 310 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 HMSDA8MTL9 139 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TRDCB7Z8K6 153 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 F8VVB4 439 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 F8VWA3 439 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 M0R1B8 84 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 CDIPTO14735 213 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 MLNRO43193 412 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TIMM8AO60220 97 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-206ENST00000483876 RHBDL1O75783 438 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 SLC22A5O76082 557 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 SFT2D2O95562 160 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 KNG1P01042 644 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 CD8AP01732 235 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TK1P04183 234 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ADH4P08319 380 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 PRKACAP17612 351 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 IGFBP2P18065 325 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 C4BPBP20851 252 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 GATA4P43694 442 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF83P51522 516 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 KLF3P57682 345 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-206ENST00000483876 GMFBP60983 142 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ERVS71-1P61550 626 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 FGL1Q08830 312 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ALKBH6Q3KRA9 238 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 LIN54Q6MZP7 749 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM65Q6PI78 240 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 Q6ZR03 302 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 MOB1BQ7L9L4 216 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TMED4Q7Z7H5 227 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 WDR86Q86TI4 376 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 KRTAP1-3Q8IUG1 177 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 SLC38A6Q8IZM9 456 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 FAM185AQ8N0U4 392 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 SUMF2Q8NBJ7 301 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 OR4A4PQ8NGN8 299 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 OR2T35Q8NGX2 323 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 MARCH1Q8TCQ1 289 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 CA5BP1Q8WTZ4 195 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM171Q8WVE6 324 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 DACT3Q96B18 629 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-206ENST00000483876 LRRC46Q96FV0 321 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 DMRTB1Q96MA1 342 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 SYT3Q9BQG1 590 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ADAT1Q9BUB4 502 aaKnown RBP4.57□□□□□ -1.68
COL17A1-206ENST00000483876 DPCDQ9BVM2 203 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-206ENST00000483876 BEX2Q9BXY8 128 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 CLEC4MQ9H2X3 399 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-206ENST00000483876 OR51B6Q9H340 312 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 C5orf66Q9H5L9 145 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 SLA2Q9H6Q3 261 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 FN3KRPQ9HA64 309 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 BEX1Q9HBH7 125 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF701Q9NV72 531 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-206ENST00000483876 EHFQ9NZC4 300 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 OPN4Q9UHM6 478 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 TINAGQ9UJW2 476 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ZDHHC8Q9ULC8 765 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 KCNIP3Q9Y2W7 256 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 WIPI2Q9Y4P8 454 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 ZGRF1Q86YA3 2104 aa4.57□□□□□ -1.68
COL17A1-206ENST00000483876 PLSCR5A0PG75 271 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 A8MV72 311 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 EEF1E1-BLOC1S5C9J1V9 151 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 NPIPB11E5RHQ5 1161 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 F5H5P2 479 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 H0YL77 283 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 SLC33A1O00400 549 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 SDCBPO00560 298 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 B3GALNT1O75752 331 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 TUSC2O75896 110 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 LHBP01229 141 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 HLA-AP01891 365 aaKnown RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 CSN2P05814 226 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 CD55P08174 381 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms