RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 Q9N2K0 584 aa7.48□□□□□ -1.21
CDC42SE1-204ENST00000483763 UFSP2Q9NUQ7 469 aa7.48□□□□□ -1.21
CDC42SE1-204ENST00000483763 HECTD1Q9ULT8 2610 aa7.48□□□□□ -1.21
CDC42SE1-204ENST00000483763 MCRIP1C9JLW8 97 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 ATP6V1G2-DDX39BF2Z307 99 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 ARPC5O15511 151 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 SFT2D2O95562 160 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 OR2H2O95918 312 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 HOXD4P09016 255 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 HLA-GP17693 338 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 FXYD4P59646 89 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 NKX6-1P78426 367 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 RBPJQ06330 500 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF718Q3SXZ3 478 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 LRRC37A5PQ49AS3 106 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 VHLLQ6RSH7 139 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 MRPL30Q8TCC3 161 aaKnown RBP7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 NEK7Q8TDX7 302 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 MUCL1Q96DR8 90 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 CITED4Q96RK1 184 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF286AQ9HBT8 521 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 CACNA1DQ01668 2161 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 KIAA2026Q5HYC2 2103 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 LRBAP50851 2863 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 PRSS44E7EML9 344 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 SIRPB1O00241 398 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 KCNAB3O43448 404 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 PSPNO60542 156 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 CFDP00746 253 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 PGAM2P15259 253 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF44P15621 663 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 GCH1P30793 250 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 SURF2Q15527 256 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 WDR82Q6UXN9 313 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 TMEM171Q8WVE6 324 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 ELMOD3Q96FG2 381 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 FXYD6Q9H0Q3 95 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 PLK3Q9H4B4 646 aa7.47□□□□□ -1.21
CDC42SE1-204ENST00000483763 CHD3Q12873 2000 aaKnown RBP7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 FXYD6-FXYD2A0A087WZ82 144 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 A0A1B0GWJ7 208 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 LINC00862A6NCI5 91 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 SLC33A1O00400 549 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 DEGS1O15121 323 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 BET1O15155 118 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 NXPH2O95156 264 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 CD8AP01732 235 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 CRYAAP02489 173 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 TMEM11P17152 192 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 AADACP22760 399 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 SERPINF1P36955 418 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 PIGPP57054 158 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 TAS2R31P59538 309 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 SEC61A1P61619 476 aaKnown RBP7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 SRSF4Q08170 494 aaKnown RBP7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 IL13RA2Q14627 380 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF146Q15072 292 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 SP6Q3SY56 376 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 TOR2AQ5JU69 321 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 RGS7BPQ6MZT1 257 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 UNQ6126/PRO20091Q6UXV3 157 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 MRGPRGQ86SM5 289 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 LDLRAD3Q86YD5 345 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 LINC00518Q8N0U6 118 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 OR11L1Q8NGX0 322 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 PLPPR1Q8TBJ4 325 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 PPP1R1CQ8WVI7 109 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 GPHA2Q96T91 129 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 SYT3Q9BQG1 590 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 HES4Q9HCC6 221 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 POLDIP2Q9Y2S7 368 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 PKDREJQ9NTG1 2253 aa7.46□□□□□ -1.21
CDC42SE1-204ENST00000483763 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 C13orf42A0A1B0GVH6 325 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 RGS11O94810 467 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF250P15622 560 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 PHLDA2Q53GA4 152 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 TEX261Q6UWH6 196 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 Q6ZS49 121 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 LINC00596Q86U02 117 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR2Z1Q8NG97 314 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 SCGB3A2Q96PL1 93 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 PDCD10Q9BUL8 212 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 TLNRD1Q9H1K6 362 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 JKAMPQ9P055 326 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 ATP23Q9Y6H3 246 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 U3KQ87 197 aa7.46□□□□□ -1.22
CDC42SE1-204ENST00000483763 SPTAN1Q13813 2472 aaKnown RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 IGKV1D-13A0A0B4J2D9 117 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 TRGV8A0A0C4DH27 118 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 A6NLC8 198 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 RFPL4AA6NLU0 287 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 TMEM210A6NLX4 147 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 RFPL4AL1F8VTS6 287 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 PTBP3O95758 552 aaKnown RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 PPYP01298 95 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 THBDP07204 575 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 CTSDP07339 412 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 IGKV1-13P0DP09 117 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 TUBG1P23258 451 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms