RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RAXQ9Y2V3 346 aa11.19□□□□□ -0.62
CPNE1-225ENST00000483495 PRR14LQ5THK1 2151 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 IGLV3-9A0A075B6K5 115 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 IGHV3-64DA0A0J9YX35 117 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 SIRPB1O00241 398 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 BET1O15155 118 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 PHLDA2Q53GA4 152 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 PRAMEF6Q5VXH4 476 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 ACP7Q6ZNF0 438 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 ACOT7LQ6ZUV0 252 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 C22orf34Q6ZV56 151 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 TMEM171Q8WVE6 324 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 RNF126Q9BV68 326 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 MBNL3Q9NUK0 354 aaKnown RBP11.18□□□□□ -0.62
CPNE1-225ENST00000483495 MBD2Q9UBB5 411 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 GLS2Q9UI32 602 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 WIPI2Q9Y4P8 454 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 SHANK1Q9Y566 2161 aa11.18□□□□□ -0.62
CPNE1-225ENST00000483495 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 ANKRD34BA5PLL1 514 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 B3GALNT1O75752 331 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 HOXB5P09067 269 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 RCC1P18754 421 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-225ENST00000483495 CFHR2P36980 270 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 RPS23P62266 143 aaKnown RBP11.17□□□□□ -0.62
CPNE1-225ENST00000483495 CLLU1Q5K131 121 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 SLC51BQ86UW2 128 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 LRP11Q86VZ4 500 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 RELL2Q8NC24 303 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-225ENST00000483495 MSI2Q96DH6 328 aaKnown RBP11.17□□□□□ -0.62
CPNE1-225ENST00000483495 TUBAL3A6NHL2 446 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 A6NLC8 198 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 H0YIZ8 118 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 C16orf97H3BN30 126 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 WNT9BO14905 357 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 CD40P25942 277 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-225ENST00000483495 RBPJQ06330 500 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 SSX8Q7RTT4 187 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 H1FOOQ8IZA3 346 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-225ENST00000483495 OR8H3Q8N146 312 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 OR11L1Q8NGX0 322 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 GLYATL2Q8WU03 294 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 MEMO1Q9Y316 297 aa11.17□□□□□ -0.62
CPNE1-225ENST00000483495 DSPP15924 2871 aaKnown RBP11.16□□□□□ -0.62
CPNE1-225ENST00000483495 IGKV1D-13A0A0B4J2D9 117 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 LINC00862A6NCI5 91 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 ATP6V1G2-DDX39BF2Z307 99 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 IFNL4K9M1U5 179 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 GPR31O00270 319 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 MPPED1O15442 326 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 IFNA21P01568 189 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 IGKV1-13P0DP09 117 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 RAB14P61106 215 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 C6orf183Q5T699 404 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 GGNBP1Q5YKI7 109 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 ALKBH2Q6NS38 261 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 PRSS54Q6PEW0 395 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 OR2Z1Q8NG97 314 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 OR10Z1Q8NGY1 313 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 C18orf12Q96KH6 178 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 GSX2Q9BZM3 304 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 SEBOXQ9HB31 216 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-225ENST00000483495 TAAR3PQ9P1P4 343 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 DUSP13Q9UII6 198 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 PTPRQQ9UMZ3 2332 aa11.16□□□□□ -0.62
CPNE1-225ENST00000483495 ATMQ13315 3056 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 ZSCAN5BA6NJL1 495 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 BCL2L11O43521 198 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 PSPNO60542 156 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 AP2S1P53680 142 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-225ENST00000483495 HMGN3Q15651 99 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 SMIM21Q3B7S5 101 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 SP6Q3SY56 376 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 LGI3Q8N145 548 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 ZNF565Q8N9K5 539 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 INO80EQ8NBZ0 244 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-225ENST00000483495 NUP37Q8NFH4 326 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 OR10J5Q8NHC4 309 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 SECTM1Q8WVN6 248 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 MRPL24Q96A35 216 aaKnown RBP11.15□□□□□ -0.62
CPNE1-225ENST00000483495 SLC5A7Q9GZV3 580 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 UFSP2Q9NUQ7 469 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 TRAPPC2LQ9UL33 140 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 OR2W1Q9Y3N9 320 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
CPNE1-225ENST00000483495 C3orf85A0A1B0GTC6 90 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.15□□□□□ -0.63
CPNE1-225ENST00000483495 PET100P0DJ07 73 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 CEBPDP49716 269 aaPredicted RBP11.15□□□□□ -0.63
CPNE1-225ENST00000483495 SRPXP78539 464 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 PAX5Q02548 391 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 ATXN7L3Q14CW9 347 aaPredicted RBP11.15□□□□□ -0.63
CPNE1-225ENST00000483495 IAH1Q2TAA2 248 aaPredicted RBP11.15□□□□□ -0.63
CPNE1-225ENST00000483495 SLC35E4Q6ICL7 350 aa11.15□□□□□ -0.63
CPNE1-225ENST00000483495 ZNF818PQ6ZRF7 136 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms