RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ARHGEF17Q96PE2 2063 aaPredicted RBP9.19□□□□□ -0.94
SIK3-210ENST00000480468 ZNF737O75373 536 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 PPYP01298 95 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 TDGF1P13385 188 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 CD99P14209 185 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 KLF3P57682 345 aaPredicted RBP9.19□□□□□ -0.94
SIK3-210ENST00000480468 PPP1CAP62136 330 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 PLCXD2Q0VAA5 305 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 RIPPLY2Q5TAB7 128 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 LEMD1Q68G75 181 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 TOMM20LQ6UXN7 152 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 PRSS58Q8IYP2 241 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 LIN37Q96GY3 246 aaPredicted RBP9.19□□□□□ -0.94
SIK3-210ENST00000480468 PGAM5Q96HS1 289 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 SLC35E1Q96K37 410 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 GABRG3Q99928 467 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 GSX1Q9H4S2 264 aaPredicted RBP9.19□□□□□ -0.94
SIK3-210ENST00000480468 ALKBH4Q9NXW9 302 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 PXMP4Q9Y6I8 212 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 SHANK1Q9Y566 2161 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 HTTP42858 3142 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 PIGBOS1A0A0B4J2F0 54 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 C20orf202A1L168 122 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 LILRA1O75019 489 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 ZNF205O95201 554 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 SYNGR4O95473 234 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 HLA-HP01893 362 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 CHRNB4P30926 498 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 WNT5AP41221 380 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 WASP42768 502 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 FGF8P55075 233 aaPredicted RBP9.19□□□□□ -0.94
SIK3-210ENST00000480468 SLC25A47Q6Q0C1 308 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 TMEM144Q7Z5S9 345 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 UEVLDQ8IX04 471 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 MRPL43Q8N983 215 aaKnown RBP9.19□□□□□ -0.94
SIK3-210ENST00000480468 ZNF721Q8TF20 911 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 WDYHV1Q96HA8 205 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 RAB40CQ96S21 281 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 B3GAT1Q9P2W7 334 aa9.19□□□□□ -0.94
SIK3-210ENST00000480468 NKX6-3A6NJ46 265 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 RER1O15258 196 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 IGHG1P01857 330 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 JMJD7P0C870 316 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 SLC25A6P12236 298 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 CLRN1P58418 232 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 TPPP2P59282 170 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 BPIFB3P59826 476 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 ASCL4Q6XD76 172 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 TBC1D26Q86UD7 250 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 WDR5BQ86VZ2 330 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 TMEM256Q8N2U0 113 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 OR1N1Q8NGS0 311 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 CMTM2Q8TAZ6 248 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 RNASE8Q8TDE3 154 aaKnown RBP9.18□□□□□ -0.94
SIK3-210ENST00000480468 SPSB1Q96BD6 273 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 VAMP8Q9BV40 100 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
SIK3-210ENST00000480468 PNO1Q9NRX1 252 aaKnown RBP9.18□□□□□ -0.94
SIK3-210ENST00000480468 TRAV39A0A0B4J263 110 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 A0A1W2PN81 502 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 LIPT2A6NK58 231 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 E9PLN8 166 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 IFNL4K9M1U5 179 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 MMP23AO75900 390 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 FAHP16930 419 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 IL3RAP26951 378 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 GNRHRP30968 328 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 CHRNA7P36544 502 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 SMAD4Q13485 552 aaKnown RBP9.17□□□□□ -0.94
SIK3-210ENST00000480468 PRSS8Q16651 343 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 HLA-DQA1Q5Y7H0 255 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 TMEM211Q6ICI0 200 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 Q6ZWC4 215 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 PIGTQ969N2 578 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 MMABQ96EY8 250 aaPredicted RBP9.17□□□□□ -0.94
SIK3-210ENST00000480468 RSG1Q9BU20 258 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 EMC6Q9BV81 110 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 PARLQ9H300 379 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 OR51B6Q9H340 312 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 LANCL2Q9NS86 450 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 BRCA2P51587 3418 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 TRBV11-1A0A0K0K1C0 115 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 OR6C6A6NF89 314 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 ANKUB1A6NFN9 424 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 H0YIG0 161 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 POU2F2P09086 479 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 LINC00271P0C7V0 271 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 HNRNPA2B1P22626 353 aaKnown RBP9.17□□□□□ -0.94
SIK3-210ENST00000480468 TM4SF4P48230 202 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 PSMB3P49720 205 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 LRRC75BQ2VPJ9 315 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 Q6ZS49 121 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 OR5D13Q8NGL4 314 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 MRPL30Q8TCC3 161 aaKnown RBP9.17□□□□□ -0.94
SIK3-210ENST00000480468 KCNE4Q8WWG9 221 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 TMEM9BQ9NQ34 198 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 FOXJ2Q9P0K8 574 aa9.17□□□□□ -0.94
SIK3-210ENST00000480468 ZNF581Q9P0T4 197 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms