RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 SH2D1BO14796 132 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 HAND1O96004 215 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 ZNF250P15622 560 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 GLRXP35754 106 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 RBMXP38159 391 aaKnown RBP12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 KLF3P57682 345 aaPredicted RBP12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 OPCMLQ14982 345 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 ATXN7L3Q14CW9 347 aaPredicted RBP12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 HERPUD1Q15011 391 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 SPIN3Q5JUX0 258 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 TLNRD1Q9H1K6 362 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 HES4Q9HCC6 221 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 C1orf123Q9NWV4 160 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 ELOVL5Q9NYP7 299 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 SHPKQ9UHJ6 478 aa12.3□□□□□ -0.44
PKNOX1-206ENST00000480179 USP9YO00507 2555 aaPredicted RBP12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 TRBV6-6A0A0A6YYG2 114 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 IGKV1-6A0A0C4DH72 117 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 HMSDA8MTL9 139 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 MPC2O95563 127 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 PPYP01298 95 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 TFF1P04155 84 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 TK1P04183 234 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 CD40P25942 277 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 MDH2P40926 338 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 HLA-DRB3P79483 266 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 NDUFA5Q16718 116 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 ZNF767PQ75MW2 155 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 SLC38A6Q8IZM9 456 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 PPP1R1CQ8WVI7 109 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 PIK3IP1Q96FE7 263 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 METTL8Q9H825 291 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 TMEM165Q9HC07 324 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 RAB18Q9NP72 206 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 ATP23Q9Y6H3 246 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 CADP27708 2225 aa12.29□□□□□ -0.44
PKNOX1-206ENST00000480179 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 DIRAS3O95661 229 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 IGHV3-13P01766 116 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 HOXB5P09067 269 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 ACAA1P09110 424 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 GNLYP22749 145 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 HTR2BP41595 481 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 RPS23P62266 143 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 FGL1Q08830 312 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 MZT1Q08AG7 82 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 ZNF146Q15072 292 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 ACP7Q6ZNF0 438 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 TMUB2Q71RG4 321 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 LRRC29Q8WV35 223 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 TMEM171Q8WVE6 324 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 NAA60Q9H7X0 242 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 SLC2A9Q9NRM0 540 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 RASL12Q9NYN1 266 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 SHANK1Q9Y566 2161 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 MPTX1A8MV57 137 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 C4BPBP20851 252 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 AP2S1P53680 142 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 ZNF880Q6PDB4 577 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 TEX261Q6UWH6 196 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 ZNF497Q6ZNH5 498 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 SECTM1Q8WVN6 248 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 RTN4IP1Q8WWV3 396 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 RND1Q92730 232 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 JKAMPQ9P055 326 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 GLS2Q9UI32 602 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 U3KQ87 197 aa12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 CHD3Q12873 2000 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-206ENST00000480179 SPRY3O43610 288 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 CD200P41217 278 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 UQCRFS1P47985 274 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 UCP3P55916 312 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 SMIM21Q3B7S5 101 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 SP6Q3SY56 376 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 MOB1BQ7L9L4 216 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 ZNF546Q86UE3 836 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 ZNF565Q8N9K5 539 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 KIRREL1Q96J84 757 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 MRPL37Q9BZE1 423 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 MFFQ9GZY8 342 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 ARL6Q9H0F7 186 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 TRAPPC2LQ9UL33 140 aa12.27□□□□□ -0.45
PKNOX1-206ENST00000480179 PTBP3O95758 552 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 THBDP07204 575 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 CTXN2P0C2S0 81 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 OR5AC1P0C628 307 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 RPA2P15927 270 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 EGR1P18146 543 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 S100A11P31949 105 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 SPRNQ5BIV9 151 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 SHEQ5VZ18 495 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 C11orf87Q6NUJ2 197 aa12.26□□□□□ -0.45
PKNOX1-206ENST00000480179 TMEM108Q6UXF1 575 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms