RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GTF2F2P13984 249 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 CELP19835 753 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 GZMHP20718 246 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 C21orf33P30042 268 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-213ENST00000480102 BDKRB2P30411 391 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF93P35789 620 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-213ENST00000480102 VHLP40337 213 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 AQP4P55087 323 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 P2RX3P56373 397 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 LRRC36Q1X8D7 754 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 C1orf100Q5SVJ3 147 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF626Q68DY1 528 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 XAF1Q6GPH4 301 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ASPHD2Q6ICH7 369 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 C16orf87Q6PH81 154 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 RDH10Q8IZV5 341 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 STX19Q8N4C7 294 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF565Q8N9K5 539 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ZNRF1Q8ND25 227 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 OR13C9Q8NGT0 318 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 OR13D1Q8NGV5 346 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 OR10AC1Q8NH08 325 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF596Q8TC21 504 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 FCGR1BQ92637 280 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 EMG1Q92979 244 aaKnown RBP3.99□□□□□ -1.77
PTCD3-213ENST00000480102 MALSU1Q96EH3 234 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF714Q96N38 554 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 DERL3Q96Q80 235 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF184Q99676 751 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-213ENST00000480102 MLST8Q9BVC4 326 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 BARHL1Q9BZE3 327 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 MS4A7Q9GZW8 240 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-213ENST00000480102 GAL3ST2Q9H3Q3 398 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 HEATR1Q9H583 2144 aaKnown RBP3.99□□□□□ -1.77
PTCD3-213ENST00000480102 C16orf95Q9H693 158 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 RANBP3Q9H6Z4 567 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-213ENST00000480102 RAB18Q9NP72 206 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 ACOT13Q9NPJ3 140 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 CLEC2DQ9UHP7 191 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 FBN3Q75N90 2809 aa3.99□□□□□ -1.77
PTCD3-213ENST00000480102 TRGV10A0A0A0MS01 117 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 TRAV1-2A0A0B4J238 106 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 TRAV40A0A0B4J280 105 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 IGKV1-12A0A0C4DH73 117 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 IGHV3-64DA0A0J9YX35 117 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 FAM230AA0A1W2PPH8 454 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 RNASEK-C17orf49H0YIS7 233 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SLC22A1O15245 554 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 XPNPEP2O43895 674 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 VENTXO95231 258 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 OR2H2O95918 312 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 IGKV1D-12P01611 117 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 IGLV1-47P01700 117 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SFTPBP07988 381 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 OCMP0CE72 109 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 IGHV4-38-2P0DP08 117 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 FGF9P31371 208 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 GABRA5P31644 462 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 TGFBR2P37173 567 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 IER3P46695 156 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 OR3A1P47881 315 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 NPBWR2P48146 333 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 GTF2A1P52655 376 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 RBM11P57052 281 aaKnown RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 ARF6P62330 175 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 NHLH2Q02577 135 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 COL10A1Q03692 680 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 RBM39Q14498 530 aaKnown RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 HABP2Q14520 560 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SLC9A3R2Q15599 337 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 KCTD21Q4G0X4 260 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 KHDC1LQ5JSQ8 128 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 FAM209BQ5JX69 171 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 OR2G6Q5TZ20 316 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 UBE2UQ5VVX9 321 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 GLT8D1Q68CQ7 371 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SLC35E4Q6ICL7 350 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 Q6P435 159 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 TRAT1Q6PIZ9 186 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 IZUMO2Q6UXV1 221 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 AHSA2Q719I0 299 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 GDPD3Q7L5L3 318 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF367Q7RTV3 350 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 C16orf82Q7Z2V1 217 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 VMO1Q7Z5L0 202 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 ANGPTL5Q86XS5 388 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 PHC2Q8IXK0 858 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 Q8N2B8 174 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 FAM89BQ8N5H3 189 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 LINC00311Q8N616 119 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 TMEM185AQ8NFB2 350 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 BPIFB6Q8NFQ5 453 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 OR52N4Q8NGI2 321 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 TSEN15Q8WW01 171 aaKnown RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 ST8SIA4Q92187 359 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 UFD1Q92890 307 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 PTX4Q96A99 478 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 C1orf147Q96MC9 270 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF48Q96MX3 618 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SLC6A7Q99884 636 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms