RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 PIGYQ3MUY2 71 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 OR11H4Q8NGC9 324 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 HIF1ANQ9NWT6 349 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 UBE2L5PA0A1B0GUS4 154 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 A0A1W2PPE2 198 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 SIGLEC5O15389 551 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 KRASP01116 189 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 SP1P08047 785 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 ZBTB25P24278 435 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 GALR1P47211 349 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 GAS1P54826 345 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 RPS11P62280 158 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL20A1-206ENST00000479501 ARSJQ5FYB0 599 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-206ENST00000479501 NR2C2APQ86WQ0 139 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
COL20A1-206ENST00000479501 SCCPDHQ8NBX0 429 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 OR2Z1Q8NG97 314 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 MARVELD3Q96A59 401 aa12.51□□□□□ -0.41
COL20A1-206ENST00000479501 ADAM20O43506 726 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 IL13RA2Q14627 380 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 ELOA3CA0A087WX78 387 aaPredicted RBP12.5□□□□□ -0.41
COL20A1-206ENST00000479501 MFNGO00587 321 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 CEACAM6P40199 344 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 DCAF12L2Q5VW00 463 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 SMIM15Q7Z3B0 74 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 SLC7A10Q9NS82 523 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 OPN1MWP04001 364 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 TAS2R45P59539 299 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 ALKBH6Q3KRA9 238 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 RFESDQ8TAC1 157 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 SNX22Q96L94 193 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 PACRGQ96M98 296 aaPredicted RBP12.5□□□□□ -0.41
COL20A1-206ENST00000479501 TTTY12Q9BZ98 90 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 TNFSF18Q9UNG2 199 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 STARD10Q9Y365 291 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 LIPGQ9Y5X9 500 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 NAT2P11245 290 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 ZNF660Q6AZW8 331 aaPredicted RBP12.5□□□□□ -0.41
COL20A1-206ENST00000479501 LINC00518Q8N0U6 118 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 SHISA5Q8N114 240 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 ZNF383Q8NA42 475 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 CORO2AQ92828 525 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 BOD1Q96IK1 185 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 MEGF10Q96KG7 1140 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 S1PR3Q99500 378 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 GLRX2Q9NS18 164 aa12.5□□□□□ -0.41
COL20A1-206ENST00000479501 PMCHP20382 165 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 ZNF83P51522 516 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-206ENST00000479501 ZNF345Q14585 488 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 FAM209BQ5JX69 171 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 CISD2Q8N5K1 135 aaKnown RBP12.49□□□□□ -0.41
COL20A1-206ENST00000479501 HDHD3Q9BSH5 251 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-206ENST00000479501 CHEK1O14757 476 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 VAX1Q5SQQ9 334 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 GTF2H5Q6ZYL4 71 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 LYRM2Q9NU23 88 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-206ENST00000479501 FZR1Q9UM11 496 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 MDC1Q14676 2089 aaKnown RBP12.49□□□□□ -0.41
COL20A1-206ENST00000479501 ANAPC1Q9H1A4 1944 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 SPRY3O43610 288 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 PPYP01298 95 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 ERVFC1-1P60608 527 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 PNRC1Q12796 327 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-206ENST00000479501 HIKESHIQ53FT3 197 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 TMEM211Q6ICI0 200 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 OR5A2Q8NGI9 324 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 PLPPR2Q96GM1 343 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 SLC2A9Q9NRM0 540 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 J3QR89 54 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 TOX4O94842 621 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 FBXW9Q5XUX1 488 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 C17orf78Q8N4C9 275 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 TMEM251Q8N6I4 163 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 SLC24A4Q8NFF2 622 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 OR10V1Q8NGI7 309 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 IL22RA2Q969J5 263 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 FBXO17Q96EF6 278 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 NRIP2Q9BQI9 281 aa12.49□□□□□ -0.41
COL20A1-206ENST00000479501 NPDC1Q9NQX5 325 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-206ENST00000479501 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
COL20A1-206ENST00000479501 CDRT15L2A8MXV6 281 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 CHRNA7P36544 502 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 MDH2P40926 338 aaKnown RBP12.48□□□□□ -0.41
COL20A1-206ENST00000479501 TMEM183BQ1AE95 376 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 MPV17LQ2QL34 196 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 Q3ZCU0 254 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 GPR27Q9NS67 375 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 TRAV34A0A0B4J273 112 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 BCL3P20749 454 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
COL20A1-206ENST00000479501 RAB40CQ96S21 281 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms