RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 APOA1P02647 267 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 LIPFP07098 398 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 CCL3L1P16619 93 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 ELK1P19419 428 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 GLP1RP43220 463 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 DLX6P56179 175 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 BTNL3Q6UXE8 466 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 Q6ZTK2 550 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 IZUMO1Q8IYV9 350 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 DTX3Q8N9I9 347 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 OR4M2Q8NGB6 313 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 OR13A1Q8NGR1 328 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 MRPL30Q8TCC3 161 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 TMPRSS13Q9BYE2 586 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 C6orf62Q9GZU0 229 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 GSX1Q9H4S2 264 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 BATF3Q9NR55 127 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 LPAR3Q9UBY5 353 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
NUDCD3-207ENST00000478769 A0A0A6YYH2 397 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 FUOMA2VDF0 154 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 TMEM235A6NFC5 223 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 A6NJ64 397 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 CTDSP2O14595 271 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 CA11O75493 328 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 NAPSAO96009 420 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 MT-ND4P03905 459 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 GATA3P23771 443 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 PAX8Q06710 450 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 FAHD2BQ6P2I3 314 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 CLEC9AQ6UXN8 241 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 TRAPPC6BQ86SZ2 158 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 KIR3DL3Q8N743 410 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 Q8N7P7 452 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 OR4K15Q8NH41 348 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 MCFD2Q8NI22 146 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 CCDC107Q8WV48 283 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 FAHD2AQ96GK7 314 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 CMTM3Q96MX0 182 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 OPN4Q9UHM6 478 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 KCNS2Q9ULS6 477 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 HIVEP2P31629 2446 aa11.14□□□□□ -0.63
NUDCD3-207ENST00000478769 TRAV18A0A075B6X5 111 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 TRGV10A0A0A0MS01 117 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 SERPINE3A8MV23 424 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 J3QLI3 93 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 RGS5O15539 181 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 XRCC3O43542 346 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 AVPP01185 164 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 MMP9P14780 707 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 SSTR5P35346 364 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 ARF6P62330 175 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 MADCAM1Q13477 382 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 ZNF260Q3ZCT1 412 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 TMEM69Q5SWH9 247 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 C1orf229Q6ZS94 237 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 MRGPRDQ8TDS7 321 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 CORO2AQ92828 525 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 PHF21AQ96BD5 680 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 S100A16Q96FQ6 103 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 ZNF714Q96N38 554 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 C12orf4Q9NQ89 552 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 DIABLOQ9NR28 239 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 YAE1D1Q9NRH1 226 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 OR6C3Q9NZP0 311 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 UBE2J1Q9Y385 318 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 MXRA5Q9NR99 2828 aa11.13□□□□□ -0.63
NUDCD3-207ENST00000478769 FAM25AB3EWG3 89 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 FAM25CB3EWG5 89 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 FAM25GB3EWG6 89 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 M0R1W7 72 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 ZNF728P0DKX0 622 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 CGB3P0DN86 165 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 CGB7P0DN87 165 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 PTHLHP12272 177 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 DLX1P56177 255 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 TAS2R20P59543 309 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 ERVFRD-1P60508 538 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 PRB3Q04118 309 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 C17orf58Q2M2W7 97 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 CR1LQ2VPA4 569 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 PRAMEF5Q5TYX0 476 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 HACD4Q5VWC8 232 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 C11orf42Q8N5U0 333 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 DMRTB1Q96MA1 342 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 WDFY2Q96P53 400 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 TBX15Q96SF7 602 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 CMSS1Q9BQ75 279 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
NUDCD3-207ENST00000478769 AUNIPQ9H7T9 357 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms