RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 PPP1CBP62140 327 aa10.4□□□□□ -0.75
PTPRF-212ENST00000477970 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.75
PTPRF-212ENST00000477970 SP6Q3SY56 376 aa10.4□□□□□ -0.75
PTPRF-212ENST00000477970 OR5D13Q8NGL4 314 aa10.4□□□□□ -0.75
PTPRF-212ENST00000477970 CARHSP1Q9Y2V2 147 aaKnown RBP10.4□□□□□ -0.75
PTPRF-212ENST00000477970 FREM1Q5H8C1 2179 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 IGKV1-6A0A0C4DH72 117 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 H0Y980 276 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 SCTP09683 121 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 CBR1P16152 277 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 UBE2NP61088 152 aaKnown RBP10.39□□□□□ -0.75
PTPRF-212ENST00000477970 TBC1D26Q86UD7 250 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 C1orf174Q8IYL3 243 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 H1FOOQ8IZA3 346 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-212ENST00000477970 SLC35G3Q8N808 338 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF565Q8N9K5 539 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 FDCSPQ8NFU4 85 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 OR5T2Q8NGG2 359 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 GINS3Q9BRX5 216 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 IL36RNQ9UBH0 155 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 LSM5Q9Y4Y9 91 aaKnown RBP10.39□□□□□ -0.75
PTPRF-212ENST00000477970 SEC11BP0C7V7 166 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 SLC25A6P12236 298 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF146Q15072 292 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 SPIN3Q5JUX0 258 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF324BQ6AW86 544 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-212ENST00000477970 OR2T2Q6IF00 324 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 SELENOHQ8IZQ5 122 aaKnown RBP10.39□□□□□ -0.75
PTPRF-212ENST00000477970 SPAG16Q8N0X2 631 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 C17orf78Q8N4C9 275 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 DMBX1Q8NFW5 382 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
PTPRF-212ENST00000477970 CDH20Q9HBT6 801 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 RAXQ9Y2V3 346 aa10.39□□□□□ -0.75
PTPRF-212ENST00000477970 NKX2-8O15522 239 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 IGKV3-15P01624 115 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 CA6P23280 308 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF273Q14593 569 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 SPERTQ8NA61 448 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 SARAFQ96BY9 339 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 HES4Q9HCC6 221 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 OBP2BQ9NPH6 170 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF705EA8MWA4 302 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-212ENST00000477970 PGA5P0DJD9 388 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 BTNL8Q6UX41 500 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 FAM169BQ8N8A8 192 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 NRIP2Q9BQI9 281 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 BORCS7-ASMTA0A0B4J1R7 106 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 A0A1B0GWJ7 208 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ATG12O94817 140 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 TSC22D1Q15714 1073 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 NMSQ5H8A3 153 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 WDR86Q86TI4 376 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 CMTM1Q8IZ96 169 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 OR52M1Q8NGK5 317 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 PRORYQ9H606 182 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ZC4H2Q9NQZ6 224 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ZDHHC8Q9ULC8 765 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 OR2W1Q9Y3N9 320 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 WIPI2Q9Y4P8 454 aa10.38□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF205O95201 554 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 CAV2P51636 162 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 PMP22Q01453 160 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF497Q6ZNH5 498 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 MYPOPQ86VE0 399 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-212ENST00000477970 COMMD1Q8N668 190 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 KIRREL1Q96J84 757 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 TLNRD1Q9H1K6 362 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 RCL1Q9Y2P8 373 aaKnown RBP10.37□□□□□ -0.75
PTPRF-212ENST00000477970 S100GP29377 79 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 RAB5CP51148 216 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 UCP2P55851 309 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 VASH2Q86V25 355 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 SPACA3Q8IXA5 215 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 SCCPDHQ8NBX0 429 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 LRRC46Q96FV0 321 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 AKR1E2Q96JD6 320 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 PLSCR4Q9NRQ2 329 aa10.37□□□□□ -0.75
PTPRF-212ENST00000477970 MBNL3Q9NUK0 354 aaKnown RBP10.37□□□□□ -0.75
PTPRF-212ENST00000477970 IGKV1D-13A0A0B4J2D9 117 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 AHRRA9YTQ3 701 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 IGKV1-13P0DP09 117 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 SPP1P10451 314 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 VDAC1P21796 283 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 KIR2DL2P43627 348 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 CCL11P51671 97 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 F2RL1P55085 397 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 GNMTQ14749 295 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF169Q14929 603 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 PXDC1Q5TGL8 231 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 C20orf204Q6ZNR8 217 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF695Q8IW36 515 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 LILRB1Q8NHL6 650 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 NEK7Q8TDX7 302 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 TRIB1Q96RU8 372 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 SEC11CQ9BY50 192 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 OR2S2Q9NQN1 319 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 UBE2J1Q9Y385 318 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms