RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 GSX1Q9H4S2 264 aaPredicted RBP16.41■□□□□ 0.22
ACTB-210ENST00000477812 ING3Q9NXR8 418 aa16.41■□□□□ 0.22
ACTB-210ENST00000477812 LINC00312Q9Y6C7 94 aa16.41■□□□□ 0.22
ACTB-210ENST00000477812 MTORP42345 2549 aa16.41■□□□□ 0.22
ACTB-210ENST00000477812 SONP18583 2426 aaKnown RBP16.4■□□□□ 0.22
ACTB-210ENST00000477812 A0A0A6YYH2 397 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 A0A1W2PQ09 198 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 hADV38S2A0JD32 116 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 MEX3AA1L020 520 aaKnown RBP16.4■□□□□ 0.22
ACTB-210ENST00000477812 A6NJ64 397 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 J3QLI3 93 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 HPGDSO60760 199 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 NAPSAO96009 420 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 CGB3P0DN86 165 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 CGB7P0DN87 165 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 MMP9P14780 707 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 GNB3P16520 340 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 CCL3L1P16619 93 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 CR1LQ2VPA4 569 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 MZT2AQ6P582 158 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 BTNL3Q6UXE8 466 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 CLEC9AQ6UXN8 241 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 C1orf229Q6ZS94 237 aaPredicted RBP16.4■□□□□ 0.22
ACTB-210ENST00000477812 SIRPDQ9H106 197 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 MIXL1Q9H2W2 232 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 AK3Q9UIJ7 227 aa16.4■□□□□ 0.22
ACTB-210ENST00000477812 SVEP1Q4LDE5 3571 aa16.39■□□□□ 0.22
ACTB-210ENST00000477812 MEIKINA0A087WXM9 373 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 AVPP01185 164 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 ELK1P19419 428 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 CDK2P24941 298 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 Q8N7P7 452 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 OR13A1Q8NGR1 328 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 MRPL30Q8TCC3 161 aaKnown RBP16.39■□□□□ 0.21
ACTB-210ENST00000477812 ZMAT3Q9HA38 289 aaKnown RBP16.39■□□□□ 0.21
ACTB-210ENST00000477812 BATF3Q9NR55 127 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 OR6C3Q9NZP0 311 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 KCNS2Q9ULS6 477 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 UBE2J1Q9Y385 318 aaPredicted RBP16.39■□□□□ 0.21
ACTB-210ENST00000477812 KPTNQ9Y664 436 aa16.39■□□□□ 0.21
ACTB-210ENST00000477812 NSD1Q96L73 2696 aaPredicted RBP16.38■□□□□ 0.21
ACTB-210ENST00000477812 TRAV39A0A0B4J263 110 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 SERPINE3A8MV23 424 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 M0R1W7 72 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 CTDSP2O14595 271 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 ZNF260Q3ZCT1 412 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 FAHD2BQ6P2I3 314 aaPredicted RBP16.38■□□□□ 0.21
ACTB-210ENST00000477812 FAHD2AQ96GK7 314 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 WDFY2Q96P53 400 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 HDHD3Q9BSH5 251 aaPredicted RBP16.38■□□□□ 0.21
ACTB-210ENST00000477812 LINC00574Q9H8X3 128 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 MBNL3Q9NUK0 354 aaKnown RBP16.38■□□□□ 0.21
ACTB-210ENST00000477812 ONECUT1Q9UBC0 465 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 ELF5Q9UKW6 265 aaPredicted RBP16.38■□□□□ 0.21
ACTB-210ENST00000477812 A3GALT2U3KPV4 340 aa16.38■□□□□ 0.21
ACTB-210ENST00000477812 HIVEP2P31629 2446 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 TRGV10A0A0A0MS01 117 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 TRBV6-6A0A0A6YYG2 114 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 C17orf98A8MV24 154 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 XRCC3O43542 346 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 GSTP1P09211 210 aaKnown RBP16.37■□□□□ 0.21
ACTB-210ENST00000477812 ZNF728P0DKX0 622 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 ARF6P62330 175 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 ZNF880Q6PDB4 577 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 C1orf122Q6ZSJ8 110 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 LAX1Q8IWV1 398 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 MCFD2Q8NI22 146 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 S100A16Q96FQ6 103 aaKnown RBP16.37■□□□□ 0.21
ACTB-210ENST00000477812 ZNF714Q96N38 554 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 TBX15Q96SF7 602 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 C7orf69Q9H7B7 122 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 UNKLQ9H9P5 680 aaKnown RBP16.37■□□□□ 0.21
ACTB-210ENST00000477812 C12orf4Q9NQ89 552 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 YAE1D1Q9NRH1 226 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 TAS2R3Q9NYW6 316 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 KIAA2026Q5HYC2 2103 aa16.37■□□□□ 0.21
ACTB-210ENST00000477812 TEP1Q99973 2627 aaKnown RBP16.36■□□□□ 0.21
ACTB-210ENST00000477812 TMEM235A6NFC5 223 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 A8MV72 311 aaPredicted RBP16.36■□□□□ 0.21
ACTB-210ENST00000477812 RBP4P02753 201 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 GLP1RP43220 463 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 ARL6IP1Q15041 203 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 C17orf58Q2M2W7 97 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 CDNFQ49AH0 187 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 HACD4Q5VWC8 232 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 IZUMO1Q8IYV9 350 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 OR4K15Q8NH41 348 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 MRGPRDQ8TDS7 321 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 UPRTQ96BW1 309 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 DIABLOQ9NR28 239 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 TMEM160Q9NX00 188 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 AUP1Q9Y679 476 aa16.36■□□□□ 0.21
ACTB-210ENST00000477812 TRAV18A0A075B6X5 111 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 A0A1W2PPH5 198 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 C15orf65H3BRN8 121 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 FSHBP01225 129 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 MELTFP08582 738 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 RCC1P18754 421 aaPredicted RBP16.35■□□□□ 0.21
ACTB-210ENST00000477812 ERVFRD-1P60508 538 aa16.35■□□□□ 0.21
ACTB-210ENST00000477812 TRAPPC6BQ86SZ2 158 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms