RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MCFD2Q8NI22 146 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 PECRQ9BY49 303 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 C6orf62Q9GZU0 229 aaPredicted RBP12.64□□□□□ -0.39
SEC13-215ENST00000477547 ABCG5Q9H222 651 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 MMP26Q9NRE1 261 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 HSF4Q9ULV5 492 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 MEIKINA0A087WXM9 373 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 hADV38S2A0JD32 116 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 MFNGO00587 321 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 RGS5O15539 181 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 APOA1P02647 267 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 LIPFP07098 398 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 PPIAL4GP0DN37 164 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 PAX5Q02548 391 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 MEF2CQ06413 473 aaPredicted RBP12.63□□□□□ -0.39
SEC13-215ENST00000477547 ZNF273Q14593 569 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 Q6ZTK2 550 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 LY6G5BQ8NDX9 201 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 FAAP24Q9BTP7 215 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 AK3Q9UIJ7 227 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 KCNS2Q9ULS6 477 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 LINC00312Q9Y6C7 94 aa12.63□□□□□ -0.39
SEC13-215ENST00000477547 TRGV10A0A0A0MS01 117 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 A0A0A6YYH2 397 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 A6NJ64 397 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 FAM25AB3EWG3 89 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 FAM25CB3EWG5 89 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 FAM25GB3EWG6 89 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 CA11O75493 328 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 GNB3P16520 340 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 GATA3P23771 443 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 CDK2P24941 298 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 TMEM50BP56557 158 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 OLFML2AQ68BL7 652 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 SLC35E4Q6ICL7 350 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 ZNF497Q6ZNH5 498 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 LAX1Q8IWV1 398 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 IZUMO1Q8IYV9 350 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 CMTM3Q96MX0 182 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
SEC13-215ENST00000477547 CHMP1AQ9HD42 196 aaPredicted RBP12.62□□□□□ -0.39
SEC13-215ENST00000477547 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 DIABLOQ9NR28 239 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 MXRA5Q9NR99 2828 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 KIR2DS1A0A191URI9 304 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 A0A1W2PPH5 198 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 RNF212BA8MTL3 300 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 CCL3L1P16619 93 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 ELK1P19419 428 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 TMEM69Q5SWH9 247 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 TMEM200BQ69YZ2 307 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 KIR3DL3Q8N743 410 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 OR4K15Q8NH41 348 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 S100A16Q96FQ6 103 aaKnown RBP12.62□□□□□ -0.39
SEC13-215ENST00000477547 ZNF714Q96N38 554 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 HDHD3Q9BSH5 251 aaPredicted RBP12.62□□□□□ -0.39
SEC13-215ENST00000477547 OR6C3Q9NZP0 311 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 ADAM30Q9UKF2 790 aa12.62□□□□□ -0.39
SEC13-215ENST00000477547 TRAV18A0A075B6X5 111 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 TRAV39A0A0B4J263 110 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 TMEM235A6NFC5 223 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 SERPINE3A8MV23 424 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 GSTP1P09211 210 aaKnown RBP12.61□□□□□ -0.39
SEC13-215ENST00000477547 CD3GP09693 182 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 MRPS15P82914 257 aaKnown RBP12.61□□□□□ -0.39
SEC13-215ENST00000477547 ARFRP1Q13795 201 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 METTL11BQ5VVY1 283 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 FAHD2BQ6P2I3 314 aaPredicted RBP12.61□□□□□ -0.39
SEC13-215ENST00000477547 GAPTQ8N292 157 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 DTX3Q8N9I9 347 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 OR13A1Q8NGR1 328 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 MRPL30Q8TCC3 161 aaKnown RBP12.61□□□□□ -0.39
SEC13-215ENST00000477547 MRGPRDQ8TDS7 321 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 CCDC107Q8WV48 283 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 FAHD2AQ96GK7 314 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
SEC13-215ENST00000477547 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
SEC13-215ENST00000477547 MIXL1Q9H2W2 232 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 GAL3ST2Q9H3Q3 398 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 NCOR1P1Q9H4R4 102 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC13-215ENST00000477547 YAE1D1Q9NRH1 226 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 EXTL2Q9UBQ6 330 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 TRAPPC2LQ9UL33 140 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 KCNK7Q9Y2U2 307 aa12.61□□□□□ -0.39
SEC13-215ENST00000477547 UBE2J1Q9Y385 318 aaPredicted RBP12.61□□□□□ -0.39
SEC13-215ENST00000477547 J3QLI3 93 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 M0R1W7 72 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 CTDSP2O14595 271 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 XRCC3O43542 346 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 CLPXO76031 633 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 MT-ND4P03905 459 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 ZNF728P0DKX0 622 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 TALDO1P37837 337 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 TAS2R20P59543 309 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms