RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 CIARTQ8N365 385 aaPredicted RBP13.38□□□□□ -0.27
VHL-203ENST00000477538 OR4M2Q8NGB6 313 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 NUDCD2Q8WVJ2 157 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 C1orf159Q96HA4 380 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 RIMS4Q9H426 269 aaPredicted RBP13.38□□□□□ -0.27
VHL-203ENST00000477538 NCOR1P1Q9H4R4 102 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 LPAR2Q9HBW0 351 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 CHMP1AQ9HD42 196 aaPredicted RBP13.38□□□□□ -0.27
VHL-203ENST00000477538 C12orf4Q9NQ89 552 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
VHL-203ENST00000477538 LPAR3Q9UBY5 353 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 RPUSD1Q9UJJ7 312 aaKnown RBP13.38□□□□□ -0.27
VHL-203ENST00000477538 RABL2BQ9UNT1 228 aa13.38□□□□□ -0.27
VHL-203ENST00000477538 VPS13CQ709C8 3753 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 A0A1W2PQ09 198 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 hADV38S2A0JD32 116 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 PITPNAQ00169 270 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 MEF2CQ06413 473 aaPredicted RBP13.37□□□□□ -0.27
VHL-203ENST00000477538 TMEM249Q2WGJ8 235 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 PYHIN1Q6K0P9 492 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 OR4K15Q8NH41 348 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 C8orf46Q8TAG6 207 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 MRPL30Q8TCC3 161 aaKnown RBP13.37□□□□□ -0.27
VHL-203ENST00000477538 C15orf40Q8WUR7 153 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 CCDC107Q8WV48 283 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 GCDHQ92947 438 aaPredicted RBP13.37□□□□□ -0.27
VHL-203ENST00000477538 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
VHL-203ENST00000477538 POLR3KQ9Y2Y1 108 aaPredicted RBP13.37□□□□□ -0.27
VHL-203ENST00000477538 TRGV10A0A0A0MS01 117 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 TRBV6-6A0A0A6YYG2 114 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 TRAV39A0A0B4J263 110 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 PPIAL4CA0A0B4J2A2 164 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 MEX3AA1L020 520 aaKnown RBP13.36□□□□□ -0.27
VHL-203ENST00000477538 B4DSR2 109 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 SMAD7O15105 426 aaKnown RBP13.36□□□□□ -0.27
VHL-203ENST00000477538 ENSAO43768 121 aaKnown RBP13.36□□□□□ -0.27
VHL-203ENST00000477538 MSMBP08118 114 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 PPIAL4GP0DN37 164 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 IGHV4-31P0DP07 118 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 PRSS3P35030 304 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 ETV6P41212 452 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 GLP1RP43220 463 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 GZMKP49863 264 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 GUCA2AQ02747 115 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 ZNF273Q14593 569 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 TMEM200BQ69YZ2 307 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 TCF23Q7RTU1 214 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 TRAPPC6BQ86SZ2 158 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 LINC01356Q8N9X3 169 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 SETD6Q8TBK2 473 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 ABHD1Q96SE0 405 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 SOSTQ9BQB4 213 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 OR6C3Q9NZP0 311 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 LINC00312Q9Y6C7 94 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 V9GYH0 126 aa13.36□□□□□ -0.27
VHL-203ENST00000477538 ACANP16112 2415 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 IGHV2-70DA0A0C4DH43 119 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 MEIOCA2RUB1 952 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 SSX5O60225 188 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 LIPFP07098 398 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 FCGR3AP08637 254 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 DTYMKP23919 212 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 PAX2Q02962 417 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 Q6ZPA2 131 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 MOB1BQ7L9L4 216 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 LY6G5BQ8NDX9 201 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 OR13A1Q8NGR1 328 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 MRGPRDQ8TDS7 321 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 CORO2AQ92828 525 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 DACT3Q96B18 629 aaPredicted RBP13.35□□□□□ -0.27
VHL-203ENST00000477538 MSI2Q96DH6 328 aaKnown RBP13.35□□□□□ -0.27
VHL-203ENST00000477538 UBE2J1Q9Y385 318 aaPredicted RBP13.35□□□□□ -0.27
VHL-203ENST00000477538 TEX15Q9BXT5 2789 aa13.35□□□□□ -0.27
VHL-203ENST00000477538 POM121CA8CG34 1229 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 LPLP06858 475 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 RCC1P18754 421 aaPredicted RBP13.34□□□□□ -0.27
VHL-203ENST00000477538 PTBP1P26599 531 aaKnown RBP eCLIP13.34□□□□□ -0.27
VHL-203ENST00000477538 CBX5P45973 191 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 RNASE12Q5GAN4 147 aaKnown RBP13.34□□□□□ -0.27
VHL-203ENST00000477538 C6orf183Q5T699 404 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 ZNF880Q6PDB4 577 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 TRAT1Q6PIZ9 186 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 SPNS3Q6ZMD2 512 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 ZNF565Q8N9K5 539 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 COX4I2Q96KJ9 171 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 SCPEP1Q9HB40 452 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 AKIP1Q9NQ31 210 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 MMP26Q9NRE1 261 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 MBNL3Q9NUK0 354 aaKnown RBP13.34□□□□□ -0.27
VHL-203ENST00000477538 ZNF230Q9UIE0 474 aaPredicted RBP13.34□□□□□ -0.27
VHL-203ENST00000477538 ZANQ9Y493 2812 aa13.34□□□□□ -0.27
VHL-203ENST00000477538 TRAV20A0A0B4J274 112 aa13.33□□□□□ -0.28
VHL-203ENST00000477538 A0A1W2PPH5 198 aa13.33□□□□□ -0.28
VHL-203ENST00000477538 MEIS3P1A6NDR6 274 aa13.33□□□□□ -0.28
VHL-203ENST00000477538 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.28
VHL-203ENST00000477538 SULT1C2O00338 296 aa13.33□□□□□ -0.28
VHL-203ENST00000477538 CTDSPLO15194 276 aa13.33□□□□□ -0.28
VHL-203ENST00000477538 CCL3L1P16619 93 aa13.33□□□□□ -0.28
VHL-203ENST00000477538 MRPS10P82664 201 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms