RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 H7BYZ3 331 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 DEDDO75618 318 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 ZNF883P0CG24 379 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 CBR1P16152 277 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 ACKR3P25106 362 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 DYNLT3P51808 116 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 SLC38A11Q08AI6 406 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 OR4F5Q8NH21 305 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 HPSE2Q8WWQ2 592 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 OR10C1Q96KK4 312 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 AQP10Q96PS8 301 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 OR4F4Q96R69 305 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 WSB1Q9Y6I7 421 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 M0R1X1 148 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 KLK10O43240 276 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 SYNGR2O43760 224 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 LY86O95711 162 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 C2orf68Q2NKX9 166 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 MRGPRDQ8TDS7 321 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-220ENST00000477528 MOB3AQ96BX8 217 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 TM2D1Q9BX74 207 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 PSG11Q9UQ72 335 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 TMEM210A6NLX4 147 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 PPP1R2P9O14990 202 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 MBPP02686 304 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-220ENST00000477528 IGSF11Q5DX21 431 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 FAM209AQ5JX71 171 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 ESRP2Q9H6T0 727 aaKnown RBP12.67□□□□□ -0.38
HDAC6-220ENST00000477528 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
HDAC6-220ENST00000477528 METTL15P1P0C7V9 234 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 TMEM50BP56557 158 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 OR2B8PP59922 312 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 EIF2S3LQ2VIR3 472 aaKnown RBP12.66□□□□□ -0.38
HDAC6-220ENST00000477528 TMEM45BQ96B21 275 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 SMIM7Q9BQ49 75 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 HES7Q9BYE0 225 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 SP9P0CG40 484 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 ZNF429Q86V71 674 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 C17orf78Q8N4C9 275 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 TMEM68Q96MH6 324 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 ZNF488Q96MN9 340 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 ATP5SQ99766 215 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 OOEPA6NGQ2 149 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 SYNGR3O43761 229 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 SAXO1Q8IYX7 474 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 OR2J1Q9GZK6 312 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 KIF26BQ2KJY2 2108 aa12.66□□□□□ -0.38
HDAC6-220ENST00000477528 hCG_1809904A0A1W2PP81 198 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 A0A1W2PPE2 198 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 A0A1W2PR64 198 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 A0A1W2PRV1 198 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 MED19A0JLT2 244 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-220ENST00000477528 Q3ZCU0 254 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 LINC00470Q9BZP3 86 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 TGOLN2O43493 480 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 EFNA2O43921 213 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 RCC1P18754 421 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-220ENST00000477528 SUCLG1P53597 346 aaKnown RBP12.65□□□□□ -0.38
HDAC6-220ENST00000477528 GABRA6Q16445 453 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 RPUSD4Q96CM3 377 aaKnown RBP12.65□□□□□ -0.38
HDAC6-220ENST00000477528 POM121Q96HA1 1249 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 A0A1B0GU03 582 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 DEFB108AA8MXU0 73 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 ABCD4O14678 606 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 CCL1P22362 96 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 KLF3P57682 345 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-220ENST00000477528 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-220ENST00000477528 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 TNFRSF1AP19438 455 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 OR10S1Q8NGN2 331 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 GAB2Q9UQC2 676 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 OSGIN2Q9Y236 505 aa12.65□□□□□ -0.38
HDAC6-220ENST00000477528 ADAM10O14672 748 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 THBS3P49746 956 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 SULT1A2P50226 295 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 PMP22Q01453 160 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 PLPPR2Q96GM1 343 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 TMEM222Q9H0R3 208 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 TICRRQ7Z2Z1 1910 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 RALGAPA1Q6GYQ0 2036 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 SPAARA0A1B0GVQ0 90 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 RBMXL3Q8N7X1 1067 aaKnown RBP12.64□□□□□ -0.39
HDAC6-220ENST00000477528 PRSS50Q9UI38 385 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 FCGR3BO75015 233 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 SUB1P53999 127 aaKnown RBP eCLIP12.64□□□□□ -0.397e-9■■■□□ 16.5
HDAC6-220ENST00000477528 ZFP36L1Q07352 338 aaKnown RBP12.64□□□□□ -0.39
HDAC6-220ENST00000477528 ASPHD2Q6ICH7 369 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 LHFPL5Q8TAF8 219 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 PLXND1Q9Y4D7 1925 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 RBFOX3A6NFN3 312 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 AGFG2O95081 481 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 CD200P41217 278 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 PHYHD1Q5SRE7 291 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms