RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 TRAPPC2LH3BP13 241 aa11.46□□□□□ -0.57
HDAC7-221ENST00000477203 SNRNP70P08621 437 aaKnown RBP11.46□□□□□ -0.57
HDAC7-221ENST00000477203 RBM11P57052 281 aaKnown RBP11.46□□□□□ -0.57
HDAC7-221ENST00000477203 COLCA1Q6ZS62 124 aa11.46□□□□□ -0.57
HDAC7-221ENST00000477203 TMEM200AQ86VY9 491 aa11.46□□□□□ -0.57
HDAC7-221ENST00000477203 ZADH2Q8N4Q0 377 aa11.46□□□□□ -0.57
HDAC7-221ENST00000477203 OR1J1Q8NGS3 322 aa11.46□□□□□ -0.57
HDAC7-221ENST00000477203 TMED6Q8WW62 240 aa11.46□□□□□ -0.57
HDAC7-221ENST00000477203 POM121Q96HA1 1249 aa11.46□□□□□ -0.57
HDAC7-221ENST00000477203 CHD3Q12873 2000 aaKnown RBP11.46□□□□□ -0.58
HDAC7-221ENST00000477203 H0YL77 283 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 SCGB1D2O95969 90 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 OR8U8P0C7N1 319 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 CEACAM1P13688 526 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 EIF2S3P41091 472 aaKnown RBP11.46□□□□□ -0.58
HDAC7-221ENST00000477203 ALDH3B1P43353 468 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 TAS2R46P59540 309 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 SUPT4H1P63272 117 aaKnown RBP11.46□□□□□ -0.58
HDAC7-221ENST00000477203 VHLLQ6RSH7 139 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 EXTL1Q92935 676 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 C10orf35Q96D05 121 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 GMPPAQ96IJ6 420 aaPredicted RBP11.46□□□□□ -0.58
HDAC7-221ENST00000477203 SLC2A8Q9NY64 477 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 USF3Q68DE3 2245 aa11.46□□□□□ -0.58
HDAC7-221ENST00000477203 ZNF891A8MT65 544 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-221ENST00000477203 KIR2DL2P43627 348 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-221ENST00000477203 CEBPDP49716 269 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-221ENST00000477203 TMEM128Q5BJH2 165 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 ZDHHC22Q8N966 263 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 STOML3Q8TAV4 291 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 SLC25A40Q8TBP6 338 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 MITD1Q8WV92 249 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 IL1F10Q8WWZ1 152 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 FAM117AQ9C073 453 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 ALX4Q9H161 411 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-221ENST00000477203 OR14J1Q9UGF5 321 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 HOXC12P31275 282 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 TBC1D28Q2M2D7 210 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 ZNF826PQ6ZT77 177 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 DMBX1Q8NFW5 382 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 SNIP1Q8TAD8 396 aaKnown RBP11.45□□□□□ -0.58
HDAC7-221ENST00000477203 OR10C1Q96KK4 312 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 TCEAL7Q9BRU2 100 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 SEBOXQ9HB31 216 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-221ENST00000477203 MSL2Q9HCI7 577 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 OR2S2Q9NQN1 319 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 UQCC1Q9NVA1 299 aa11.45□□□□□ -0.58
HDAC7-221ENST00000477203 C14orf166Q9Y224 244 aaKnown RBP11.45□□□□□ -0.58
HDAC7-221ENST00000477203 A0A1W2PPH5 198 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 PDCD6O75340 191 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 TACC2O95359 2948 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 RPA2P15927 270 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 PCP4P48539 62 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 TGFBR3Q03167 851 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 FAM189A2Q15884 450 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 DOCK11Q5JSL3 2073 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 SPIN3Q5JUX0 258 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 VAX1Q5SQQ9 334 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 ARRDC1Q8N5I2 433 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 CCDC54Q8NEL0 328 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 SPSB4Q96A44 273 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 CLCF1Q9UBD9 225 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 SIRPB1O00241 398 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 CDIPTO14735 213 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 SCTP09683 121 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 FUT3P21217 361 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 PIGPP57054 158 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 PPP1CBP62140 327 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 CEACAM21Q3KPI0 293 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 MEX3BQ6ZN04 569 aaKnown RBP11.44□□□□□ -0.58
HDAC7-221ENST00000477203 TGIF2LXQ8IUE1 241 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 MKXQ8IYA7 352 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
HDAC7-221ENST00000477203 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 HIST1H2BAQ96A08 127 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 OSGIN2Q9Y236 505 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 DMRT1Q9Y5R6 373 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 H7C1Q1 480 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 TNFSF12O43508 249 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 NXPH3O95157 252 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 MPV17P39210 176 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 DAZAP2Q15038 168 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-221ENST00000477203 ABCA11PQ4W5N1 156 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 PYY3Q5JQD4 70 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 NSUN5P2Q63ZY6 315 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 SECTM1Q8WVN6 248 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 ARL11Q969Q4 196 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 SARAFQ96BY9 339 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 TOLLIPQ9H0E2 274 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 OBP2BQ9NPH6 170 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
HDAC7-221ENST00000477203 M0R036 132 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 WDR1O75083 606 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 DUS4LO95620 317 aaKnown RBP11.43□□□□□ -0.58
HDAC7-221ENST00000477203 ARG1P05089 322 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 Q6ZSR3 168 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 OR4A4PQ8NGN8 299 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 COL25A1Q9BXS0 654 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms