RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MAP3K19Q56UN5 1328 aa2.93□□□□□ -1.94
VPS50-212ENST00000476413 RAB3GAP2Q9H2M9 1393 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 TRPC5OSA6NMA1 111 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 LEUTXA8MZ59 168 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 J3QLI3 93 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 POP7O75817 140 aaKnown RBP2.92□□□□□ -1.94
VPS50-212ENST00000476413 P0C880 135 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 ZNF3P17036 446 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 ZNF664Q8N3J9 261 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 REEP6Q96HR9 211 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 PYURFQ96I23 114 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 OR2D2Q9H210 308 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 CD300AQ9UGN4 299 aa2.92□□□□□ -1.94
VPS50-212ENST00000476413 ZNF443Q9Y2A4 671 aaPredicted RBP2.92□□□□□ -1.94
VPS50-212ENST00000476413 H3BMM0 161 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 MPZL2O60487 215 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 PDYNP01213 254 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 IGHV3-53P01767 116 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 RD3LP0DJH9 198 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 PYCR1P32322 319 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 AMMECR1LQ6DCA0 310 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 CYHR1Q6ZMK1 362 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 SSX7Q7RTT5 188 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 UBE2WQ96B02 151 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 OTUB2Q96DC9 234 aa2.91□□□□□ -1.94
VPS50-212ENST00000476413 ZNF230Q9UIE0 474 aaPredicted RBP2.91□□□□□ -1.94
VPS50-212ENST00000476413 NUP153P49790 1475 aaKnown RBP2.9□□□□□ -1.94
VPS50-212ENST00000476413 LRPPRCP42704 1394 aaKnown RBP2.9□□□□□ -1.94
VPS50-212ENST00000476413 GPR171O14626 319 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 FGF16O43320 207 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 IGHMP01871 453 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 S100A2P29034 98 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 EVI2BP34910 448 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 DEFB134Q4QY38 66 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 TIMM23BQ5SRD1 257 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 OLIG3Q7RTU3 272 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 CALHM3Q86XJ0 350 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 MUC15Q8N387 334 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 DYNC2LI1Q8TCX1 351 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 CLDN23Q96B33 292 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 TVP23CQ96ET8 276 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 TMEM56Q96MV1 263 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 TM2D3Q9BRN9 247 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 DUSP21Q9H596 190 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 ZNF391Q9UJN7 358 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 FBXL3Q9UKT7 428 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 SSH2Q76I76 1423 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 LTBP4Q8N2S1 1624 aa2.9□□□□□ -1.95
VPS50-212ENST00000476413 A0A0B4J2C4 111 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 IGKV2-24A0A0C4DH68 120 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 A0A1B0GTI1 187 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 OR5H14A6NHG9 310 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 CPSF4O95639 269 aaKnown RBP2.89□□□□□ -1.95
VPS50-212ENST00000476413 MLNP12872 115 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 CTLA4P16410 223 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 PRPS1L1P21108 318 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 DMTNQ08495 405 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 MMDQ15546 238 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 HES3Q5TGS1 186 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 Q6ZQT7 251 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 PAGE2Q7Z2X7 111 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 ASCL3Q9NQ33 180 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 ASF1BQ9NVP2 202 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 U3KQK5 164 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 ZBED9Q6R2W3 1325 aa2.89□□□□□ -1.95
VPS50-212ENST00000476413 PTPRKQ15262 1439 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 IGKV1D-37A0A075B6S9 117 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 SYNGR1O43759 233 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 CBX5P45973 191 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 MP68P56378 58 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 DHRS2Q13268 280 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 ZCWPW2Q504Y3 356 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 OR4A5Q8NH83 315 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 TRNT1Q96Q11 434 aaKnown RBP2.88□□□□□ -1.95
VPS50-212ENST00000476413 SLC19A3Q9BZV2 496 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 CHMP4BQ9H444 224 aaKnown RBP2.88□□□□□ -1.95
VPS50-212ENST00000476413 OR5V1Q9UGF6 321 aa2.88□□□□□ -1.95
VPS50-212ENST00000476413 DNMT1P26358 1616 aaKnown RBP2.88□□□□□ -1.95
VPS50-212ENST00000476413 EFCAB9A8MZ26 197 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 GGTLC3B5MD39 225 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 SOX14O95416 240 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 IGLV6-57P01721 117 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 PSMD7P51665 324 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 STC1P52823 247 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 RAB2AP61019 212 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 FAM3AP98173 230 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 IHHQ14623 411 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 ZNF141Q15928 474 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 NIPAL1Q6NVV3 410 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 LYPD6Q86Y78 171 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 CPNE9Q8IYJ1 553 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 KRTCAP2Q8N6L1 136 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 OR7G1Q8NGA0 311 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 KCTD4Q8WVF5 259 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 APOBEC3DQ96AK3 386 aaPredicted RBP2.87□□□□□ -1.95
VPS50-212ENST00000476413 CMBLQ96DG6 245 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 ALX4Q9H161 411 aaPredicted RBP2.87□□□□□ -1.95
VPS50-212ENST00000476413 C1orf109Q9NX04 203 aa2.87□□□□□ -1.95
VPS50-212ENST00000476413 A6NED7 52 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms