RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZNF737O75373 536 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 CCNKO75909 580 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRAF4-210ENST00000475329 PGAM2P15259 253 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 MUC1P15941 1255 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-210ENST00000475329 PAX5Q02548 391 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 SURF2Q15527 256 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-210ENST00000475329 C4orf46Q504U0 113 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 FAM201AQ5SY85 155 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 AADACL3Q5VUY0 350 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 TEX36Q5VZQ5 186 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 CD276Q5ZPR3 534 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF626Q68DY1 528 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 STUMQ69YW2 141 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-210ENST00000475329 DHRS11Q6UWP2 260 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 MEX3BQ6ZN04 569 aaKnown RBP11.5□□□□□ -0.57
TRAF4-210ENST00000475329 C20orf204Q6ZNR8 217 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 C17orf107Q6ZR85 190 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 PEG10Q86TG7 708 aaKnown RBP11.5□□□□□ -0.57
TRAF4-210ENST00000475329 OR4A4PQ8NGN8 299 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 ANGPTL6Q8NI99 470 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 SNX22Q96L94 193 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 MBNL3Q9NUK0 354 aaKnown RBP11.5□□□□□ -0.57
TRAF4-210ENST00000475329 ROS1P08922 2347 aa11.5□□□□□ -0.57
TRAF4-210ENST00000475329 CFAP46Q8IYW2 2715 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 TRAV38-1A0A0B4J264 116 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 OR5H14A6NHG9 310 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 TMEM178BH3BS89 294 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 LGALS8O00214 317 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 MGST3O14880 152 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 GOSR1O95249 250 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 HPXP02790 462 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 TK1P04183 234 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 SCTP09683 121 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 OR4E1P0C645 316 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 RCC1P18754 421 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-210ENST00000475329 FCGR2CP31995 323 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 HERV-K104P61576 105 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 SEC61A1P61619 476 aaKnown RBP11.49□□□□□ -0.57
TRAF4-210ENST00000475329 IGSF11Q5DX21 431 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 KIAA2026Q5HYC2 2103 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 KRBOX4Q5JUW0 171 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 FAHD2BQ6P2I3 314 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-210ENST00000475329 SLC25A42Q86VD7 318 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 TGIF2LYQ8IUE0 185 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF561Q8N587 486 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 SDSLQ96GA7 329 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 FAHD2AQ96GK7 314 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 COQ2Q96H96 371 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 VRK1Q99986 396 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-210ENST00000475329 CABLES2Q9BTV7 478 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 FXYD6Q9H0Q3 95 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 DCAF16Q9NXF7 216 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 KCNIP1Q9NZI2 227 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF69Q9UC07 566 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 KIF25Q9UIL4 384 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
TRAF4-210ENST00000475329 C14orf166Q9Y224 244 aaKnown RBP11.49□□□□□ -0.57
TRAF4-210ENST00000475329 MEIKINA0A087WXM9 373 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 IGHV1-69-2A0A0G2JMI3 117 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 A6NNC1 897 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 BET1O15155 118 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 DIRAS3O95661 229 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 UBE2MP61081 183 aaKnown RBP11.48□□□□□ -0.57
TRAF4-210ENST00000475329 AESQ08117 197 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 HERPUD1Q15011 391 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 HMGN3Q15651 99 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 C6orf183Q5T699 404 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 C11orf71Q6IPW1 123 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 TRAT1Q6PIZ9 186 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 DEFB108BQ8NET1 73 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 OR52B4Q8NGK2 314 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 OR5D13Q8NGL4 314 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF431Q8TF32 576 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-210ENST00000475329 CAPSLQ8WWF8 208 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 CCL17Q92583 94 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 MOB3AQ96BX8 217 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 SHARPINQ9H0F6 387 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF665Q9H7R5 613 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF221Q9UK13 617 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 PCDHB10Q9UN67 800 aa11.48□□□□□ -0.57
TRAF4-210ENST00000475329 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-210ENST00000475329 PPIAL4EA0A075B759 164 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 TRAV39A0A0B4J263 110 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 FAM172BPA6NC97 362 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 A8MV72 311 aaPredicted RBP11.47□□□□□ -0.57
TRAF4-210ENST00000475329 PPIAL4DF5H284 164 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 BOLA2-SMG1P6H3BVE0 249 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 K7N7A8 449 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF205O95201 554 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 GYPAP02724 150 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 ZNF728P0DKX0 622 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 PPIAL4FP0DN26 164 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 AADACP22760 399 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 FXYD4P59646 89 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 CD300CQ08708 224 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 BAMBIQ13145 260 aa11.47□□□□□ -0.57
TRAF4-210ENST00000475329 EDDM3AQ14507 147 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms