RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 TMEM45BQ96B21 275 aa12.08□□□□□ -0.48
RPGR-206ENST00000474584 ZNF845Q96IR2 970 aaPredicted RBP12.08□□□□□ -0.48
RPGR-206ENST00000474584 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
RPGR-206ENST00000474584 GSN-AS1Q9NRJ2 163 aa12.08□□□□□ -0.48
RPGR-206ENST00000474584 NOSIPQ9Y314 301 aaKnown RBP12.08□□□□□ -0.48
RPGR-206ENST00000474584 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 IGKV1D-13A0A0B4J2D9 117 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 PIGBOS1A0A0B4J2F0 54 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 H0Y980 276 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 LINC01387J3KSC0 135 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 NTN3O00634 580 aaPredicted RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 HSPB6O14558 160 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 MRPL33O75394 65 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 TUSC2O75896 110 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 IGKV1-13P0DP09 117 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 OTX2P32243 289 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 EIF2S3P41091 472 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 CEBPGP53567 150 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 ID3Q02535 119 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 OR8G1Q15617 311 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 MRPL21Q7Z2W9 205 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 OR5D13Q8NGL4 314 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 IL22RA2Q969J5 263 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 RBMXL1Q96E39 390 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 SIGLEC12Q96PQ1 595 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 LIPGQ9Y5X9 500 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 ATP23Q9Y6H3 246 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 HBE1P02100 147 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 DUSP3P51452 185 aaPredicted RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 ZFP36L1Q07352 338 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 CEACAM21Q3KPI0 293 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 DPPA3Q6W0C5 159 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 STX12Q86Y82 276 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 MKXQ8IYA7 352 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 YPEL4Q96NS1 127 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 GPHA2Q96T91 129 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 ATP5SQ99766 215 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
RPGR-206ENST00000474584 MRPS18CQ9Y3D5 142 aaKnown RBP12.07□□□□□ -0.48
RPGR-206ENST00000474584 A0A087WWC5 75 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 LINC00587B1AMM8 73 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 TXNL1O43396 289 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 CLN5O75503 358 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 NXPH3O95157 252 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 HSPB1P04792 205 aaKnown RBP12.06□□□□□ -0.48
RPGR-206ENST00000474584 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
RPGR-206ENST00000474584 CEACAM1P13688 526 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
RPGR-206ENST00000474584 RPS10P46783 165 aaKnown RBP12.06□□□□□ -0.48
RPGR-206ENST00000474584 UBE2KP61086 200 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 RPS18P62269 152 aaKnown RBP12.06□□□□□ -0.48
RPGR-206ENST00000474584 RUNX1Q01196 453 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 IL24Q13007 206 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 MUCL1Q96DR8 90 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 CCDC163A0A0D9SF12 145 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 CHST1O43916 411 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 DFFBO76075 338 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 SCAF4O95104 1147 aaKnown RBP12.06□□□□□ -0.48
RPGR-206ENST00000474584 SLC34A2O95436 690 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 TMEM50AO95807 157 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 ZNF154Q13106 437 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 ACER2Q5QJU3 275 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 PPP1R32Q7Z5V6 425 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 OR51M1Q9H341 326 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 TMPRSS5Q9H3S3 457 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 RIMS4Q9H426 269 aaPredicted RBP12.06□□□□□ -0.48
RPGR-206ENST00000474584 WSB1Q9Y6I7 421 aa12.06□□□□□ -0.48
RPGR-206ENST00000474584 C5orf49A4QMS7 147 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 SLC33A1O00400 549 aaPredicted RBP12.05□□□□□ -0.48
RPGR-206ENST00000474584 TNFSF12O43508 249 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 S100PP25815 95 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 CYB561P49447 251 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 GFRA1P56159 465 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 ARF1P84077 181 aaKnown RBP12.05□□□□□ -0.48
RPGR-206ENST00000474584 Q0VFX4 171 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 ICAM4Q14773 271 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 SLC23A3Q6PIS1 610 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 ZNF429Q86V71 674 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 ODF3L1Q8IXM7 274 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 PLPPR1Q8TBJ4 325 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 APOBEC3DQ96AK3 386 aaPredicted RBP12.05□□□□□ -0.48
RPGR-206ENST00000474584 DEPPQ9NTK1 212 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 MTCH1Q9NZJ7 389 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 FREM1Q5H8C1 2179 aa12.05□□□□□ -0.48
RPGR-206ENST00000474584 EPHA1P21709 976 aa12.04□□□□□ -0.48
RPGR-206ENST00000474584 TAS2R30P59541 319 aa12.04□□□□□ -0.48
RPGR-206ENST00000474584 KIAA0141Q14154 515 aaPredicted RBP12.04□□□□□ -0.48
RPGR-206ENST00000474584 SLC25A24Q6NUK1 477 aa12.04□□□□□ -0.48
RPGR-206ENST00000474584 LINC00596Q86U02 117 aa12.04□□□□□ -0.48
RPGR-206ENST00000474584 HIST1H2AAQ96QV6 131 aa12.04□□□□□ -0.48
RPGR-206ENST00000474584 LINC00470Q9BZP3 86 aa12.04□□□□□ -0.48
RPGR-206ENST00000474584 FGF23Q9GZV9 251 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms