RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 C19orf25Q9UFG5 118 aaPredicted RBP6.98□□□□□ -1.29
CCDC93-208ENST00000474546 MPDZO75970 2070 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 A0A1B0GWJ7 208 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 A0A1B0GX78 115 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 CDC14CA4D256 554 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 AQP7P3A6NL99 342 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 A8MWP6 167 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 C10orf142B7Z368 130 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 H0Y980 276 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 M0R143 59 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 TP53I11O14683 189 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 TOX3O15405 576 aaPredicted RBP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 KCNAB3O43448 404 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 MPZL1O95297 269 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 CNOT4O95628 575 aaKnown RBP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 TYMSP04818 313 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 KLK3P07288 261 aaPredicted RBP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 MYF5P13349 255 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 FABP4P15090 132 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 PNLIPP16233 465 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 PI3P19957 117 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 FUT3P21217 361 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 AADACP22760 399 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 AKR1C3P42330 323 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 NPBWR2P48146 333 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 HNRNPKP61978 463 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 RNF4P78317 190 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 ID3Q02535 119 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 FMODQ06828 376 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 GAGE1Q13065 139 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 MFAP5Q13361 173 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 RAB35Q15286 201 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 SHBQ15464 509 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 USF2Q15853 346 aaPredicted RBP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 ATP6V1FQ16864 119 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 SP5Q6BEB4 398 aaPredicted RBP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 SPSB3Q6PJ21 355 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 FIP1L1Q6UN15 594 aaKnown RBP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 CLEC9AQ6UXN8 241 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 CYP2G1PQ6ZSU1 146 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 OSR2Q8N2R0 312 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 TMEM252Q8N6L7 170 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 OR10AD1Q8NGE0 317 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 OR10S1Q8NGN2 331 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 OR2I1PQ8NGU4 316 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 OR1P1Q8NH06 330 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 TOMM40LQ969M1 308 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 BORCS8Q96FH0 119 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 KLHDC7BQ96G42 594 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 C11orf1Q9H5F2 150 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 CALHM2Q9HA72 323 aa6.97□□□□□ -1.29
CCDC93-208ENST00000474546 FOXD3Q9UJU5 478 aaPredicted RBP6.97□□□□□ -1.29
CCDC93-208ENST00000474546 NIPBLQ6KC79 2804 aaeCLIP6.96□□□□□ -1.29
CCDC93-208ENST00000474546 MED13LQ71F56 2210 aa6.96□□□□□ -1.29
CCDC93-208ENST00000474546 IGKV1-9A0A0C4DH69 117 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 OR2W5A6NFC9 320 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 RNF212BA8MTL3 300 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 NPIPA2E9PIF3 369 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 H0YL77 283 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 MASP2O00187 686 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 TCAPO15273 167 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 XRCC2O43543 280 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 TRAF3IP2O43734 574 aaPredicted RBP6.96□□□□□ -1.3
CCDC93-208ENST00000474546 LMX1BO60663 402 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 PPYP01298 95 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SERPINA7P05543 415 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 LINC00614P0C842 121 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 TRGC1P0CF51 173 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 THEGLP0DJG4 465 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 IL2RGP31785 369 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 PPP1CCP36873 323 aaKnown RBP6.96□□□□□ -1.3
CCDC93-208ENST00000474546 PSMB3P49720 205 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 TNFSF10P50591 281 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 NUTF2P61970 127 aaKnown RBP6.96□□□□□ -1.3
CCDC93-208ENST00000474546 MRPS34P82930 218 aaKnown RBP6.96□□□□□ -1.3
CCDC93-208ENST00000474546 MYBPHQ13203 477 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SQSTM1Q13501 440 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 DEFB110Q30KQ9 67 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 NRN1LQ496H8 165 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 COX19Q49B96 90 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF787Q6DD87 383 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 ETV3LQ6ZN32 361 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 MOB1BQ7L9L4 216 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SPEM1Q8N4L4 309 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SLC35G3Q8N808 338 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 CYB561D1Q8N8Q1 229 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 OR13H1Q8NG92 308 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 OR5C1Q8NGR4 320 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 LSM10Q969L4 123 aaKnown RBP6.96□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM68Q96MH6 324 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 HIST1H2BLQ99880 126 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SF3B5Q9BWJ5 86 aaKnown RBP6.96□□□□□ -1.3
CCDC93-208ENST00000474546 MAGT1Q9H0U3 335 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 WFDC1Q9HC57 220 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SDF2L1Q9HCN8 221 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 PNRC2Q9NPJ4 139 aaKnown RBP6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SEMA5BQ9P283 1151 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 PIGLQ9Y2B2 252 aa6.96□□□□□ -1.3
CCDC93-208ENST00000474546 SLCO1B1Q9Y6L6 691 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms