RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 IL17BQ9UHF5 180 aa16.06■□□□□ 0.16
ECHDC1-214ENST00000474289 FUT9Q9Y231 359 aa16.06■□□□□ 0.16
ECHDC1-214ENST00000474289 KIR2DL5BA0A0G2JN68 375 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 KIR2DL5BA0A0G2JPC4 375 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 H3BP45 60 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 IGHV4-34P06331 123 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 CTHP32929 405 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 PRSS8Q16651 343 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 RSPO1Q2MKA7 263 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 KIR2DL5AQ8N109 375 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 SMIM7Q9BQ49 75 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 ELOVL1Q9BW60 279 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 NAT8Q9UHE5 227 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 POLR3KQ9Y2Y1 108 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 RNF115Q9Y4L5 304 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 SPTY2D1-AS1A0A0U1RR47 76 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 TCRBV21S2A2A0A5A6 115 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 A6NNC1 897 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 GALR1P47211 349 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 FAM3BP58499 235 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 HIST3H3Q16695 136 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 OR10J5Q8NHC4 309 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 MBD3L1Q8WWY6 194 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 WFIKKN1Q96NZ8 548 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 RBKSQ9H477 322 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 Q9N2K0 584 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 HS3ST3A1Q9Y663 406 aa16.05■□□□□ 0.16
ECHDC1-214ENST00000474289 A0A1W2PNR3 127 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 CLEC18AA5D8T8 446 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 IFNA5P01569 189 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 THEGLP0DJG4 465 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 CCKARP32238 428 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 PCP4P48539 62 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 BTNL3Q6UXE8 466 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 CLEC18CQ8NCF0 446 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 PRSS50Q9UI38 385 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 EXPH5Q8NEV8 1989 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 A0A1W2PPQ1 181 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 SCGB1D1O95968 90 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 CST2P09228 141 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 PDCD1Q15116 288 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 SPIN3Q5JUX0 258 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 ACTL10Q5JWF8 245 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 Q6ZSR3 168 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 CYP2G1PQ6ZSU1 146 aa16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 THAP3Q8WTV1 239 aaPredicted RBP16.04■□□□□ 0.16
ECHDC1-214ENST00000474289 H7BYZ3 331 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 RPL29P47914 159 aaKnown RBP16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 NPBWR2P48146 333 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 BSXQ3C1V8 233 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 SNAI3Q3KNW1 292 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 C10orf35Q96D05 121 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 ZNF845Q96IR2 970 aaPredicted RBP16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 LRRC61Q9BV99 259 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 VDAC1P21796 283 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 TMEM267Q0VDI3 215 aaPredicted RBP16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 RTP5Q14D33 572 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 MRGPRGQ86SM5 289 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 GBGT1Q8N5D6 347 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 OR5B12Q96R08 314 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 SLC7A10Q9NS82 523 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 FKBP11Q9NYL4 201 aa16.03■□□□□ 0.16
ECHDC1-214ENST00000474289 CCDC85CA6NKD9 419 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 RPLP1P05386 114 aaKnown RBP16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 GABRG2P18507 467 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 OR3A1P47881 315 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 SUMO3P55854 103 aaPredicted RBP16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 PRSS12P56730 875 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 FOXL2P58012 376 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 GAGE1Q13065 139 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 SHHQ15465 462 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 TMEM241Q24JQ0 296 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 ZNF774Q6NX45 483 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 ZNF818PQ6ZRF7 136 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 CENPVQ7Z7K6 275 aaPredicted RBP16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 GJC3Q8NFK1 279 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 SPSB1Q96BD6 273 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 AGMATQ9BSE5 352 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 TAAR3PQ9P1P4 343 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 SEMA5BQ9P283 1151 aa16.02■□□□□ 0.16
ECHDC1-214ENST00000474289 IGHV3-20A0A0C4DH32 117 aa16.02■□□□□ 0.15
ECHDC1-214ENST00000474289 IGKV1-12A0A0C4DH73 117 aa16.02■□□□□ 0.15
ECHDC1-214ENST00000474289 M0R135 149 aa16.02■□□□□ 0.15
ECHDC1-214ENST00000474289 IGKV1D-12P01611 117 aa16.02■□□□□ 0.15
ECHDC1-214ENST00000474289 RPL23P62829 140 aaKnown RBP16.02■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF295-AS1Q8N0V1 137 aa16.02■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF799Q96GE5 643 aa16.02■□□□□ 0.15
ECHDC1-214ENST00000474289 TRIOO75962 3097 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 FER1L5A0AVI2 2057 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 LRRC3CA6NJW4 275 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 HRASP01112 189 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 ACOT6Q3I5F7 207 aaPredicted RBP16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 GAPTQ8N292 157 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 ADPRHL1Q8NDY3 354 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 OR2AE1Q8NHA4 323 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 POC1BQ8TC44 478 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 ST3GAL6Q9Y274 331 aa16.01■□□□□ 0.15
ECHDC1-214ENST00000474289 MSR1P21757 451 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 OTX1P32242 354 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms