RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 OR3A1P47881 315 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 RAB25P57735 213 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 SEC61A1P61619 476 aaKnown RBP10.75□□□□□ -0.69
VPS13D-205ENST00000473099 C6orf183Q5T699 404 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 STUMQ69YW2 141 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 C11orf71Q6IPW1 123 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 FAHD2BQ6P2I3 314 aaPredicted RBP10.75□□□□□ -0.69
VPS13D-205ENST00000473099 DHRS11Q6UWP2 260 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 ASCC1Q8N9N2 400 aaKnown RBP10.75□□□□□ -0.69
VPS13D-205ENST00000473099 ANGPTL6Q8NI99 470 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 NEU4Q8WWR8 484 aaPredicted RBP10.75□□□□□ -0.69
VPS13D-205ENST00000473099 SDSLQ96GA7 329 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 FAHD2AQ96GK7 314 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 VRK1Q99986 396 aaPredicted RBP10.75□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF665Q9H7R5 613 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 RAB9BQ9NP90 201 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 MBNL3Q9NUK0 354 aaKnown RBP10.75□□□□□ -0.69
VPS13D-205ENST00000473099 TMEM106BQ9NUM4 274 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 KCNIP1Q9NZI2 227 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 OPN4Q9UHM6 478 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF222Q9UK12 451 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 TRAPPC2LQ9UL33 140 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 PCDHB10Q9UN67 800 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 RELNP78509 3460 aa10.75□□□□□ -0.69
VPS13D-205ENST00000473099 UTP20O75691 2785 aaKnown RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 PPIAL4EA0A075B759 164 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 IGKV1D-8A0A087WSZ0 117 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 PPIAL4DF5H284 164 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 K7N7A8 449 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 NDUFA2O43678 99 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 PSPNO60542 156 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF737O75373 536 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 CYB5R3P00387 301 aaPredicted RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 TK1P04183 234 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 PPIAL4FP0DN26 164 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 CEBPDP49716 269 aaPredicted RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 MRPS11P82912 194 aaKnown RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 ATXN7L3Q14CW9 347 aaPredicted RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 HFEQ30201 348 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 ATPAF1Q5TC12 328 aaPredicted RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 GLDNQ6ZMI3 551 aaPredicted RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 C17orf107Q6ZR85 190 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 CD177Q8N6Q3 437 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 PLPPR1Q8TBJ4 325 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 ZFAND1Q8TCF1 268 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 DACT3Q96B18 629 aaPredicted RBP10.74□□□□□ -0.69
VPS13D-205ENST00000473099 CABLES2Q9BTV7 478 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 GHITMQ9H3K2 345 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 DLL4Q9NR61 685 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 FLVCR2Q9UPI3 526 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 PPIAL4AQ9Y536 164 aa10.74□□□□□ -0.69
VPS13D-205ENST00000473099 A0A0A6YYJ9 748 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 NPIPB11E5RHQ5 1161 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 SDCBPO00560 298 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 CREBL2O60519 120 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 DANCRP0C864 163 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 GSTT2P0CG29 244 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 ERP29P30040 261 aaKnown RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 UCP3P55916 312 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 HERV-K104P61576 105 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 RRAS2P62070 204 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 IL13RA1P78552 427 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 KRBOX4Q5JUW0 171 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 CD276Q5ZPR3 534 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF660Q6AZW8 331 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 C11orf88Q6PI97 169 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF788Q6ZQV5 615 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 SLC36A1Q7Z2H8 476 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 PEG10Q86TG7 708 aaKnown RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 AKAP14Q86UN6 197 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 ZCCHC24Q8N2G6 241 aaKnown RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 CCL17Q92583 94 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 CYYR1Q96J86 154 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 LURAP1Q96LR2 239 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF2Q9BSG1 426 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 TRAF4Q9BUZ4 470 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 MED28Q9H204 178 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 OR51J1Q9H342 316 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 SLC23A1Q9UHI7 598 aa10.73□□□□□ -0.69
VPS13D-205ENST00000473099 C14orf166Q9Y224 244 aaKnown RBP10.73□□□□□ -0.69
VPS13D-205ENST00000473099 IGHV3OR15-7A0A075B7D8 119 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 SIGLEC5O15389 551 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 HPXP02790 462 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 TLE4Q04727 773 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 CBX3Q13185 183 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 HMGN3Q15651 99 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 AADACL3Q5VUY0 350 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 LPCAT3Q6P1A2 487 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 Q6ZPA2 131 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 SLC25A42Q86VD7 318 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 TMEM185AQ8NFB2 350 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 OR5T2Q8NGG2 359 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 MARCH1Q8TCQ1 289 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 NEURL2Q9BR09 285 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 SHARPINQ9H0F6 387 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 OR6C3Q9NZP0 311 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 KIF25Q9UIL4 384 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 GPR132Q9UNW8 380 aa10.72□□□□□ -0.69
VPS13D-205ENST00000473099 VSIG4Q9Y279 399 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms