RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 NAA60Q9H7X0 242 aa4.14□□□□□ -1.75
TM4SF1-202ENST00000472441 DUSP13Q9UII6 198 aa4.14□□□□□ -1.75
TM4SF1-202ENST00000472441 hCG_1807616A0A1W2PRN6 198 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 TRDCB7Z8K6 153 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 MKRN2OSH3BPM6 223 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 M0R1B8 84 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 WNT9BO14905 357 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 B3GALNT1O75752 331 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 IGKV3-15P01624 115 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 TFF1P04155 84 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 NMBP08949 121 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 GCH1P30793 250 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 UBA52P62987 128 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 TOR2AQ5JU69 321 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 PRAMEF6Q5VXH4 476 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 CLEC9AQ6UXN8 241 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 PDZD9Q8IXQ8 264 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 SLC38A6Q8IZM9 456 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 MOB3AQ96BX8 217 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 RBMXL1Q96E39 390 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 ARPC5LQ9BPX5 153 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 PKIBQ9C010 78 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 SLC5A7Q9GZV3 580 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 RASL12Q9NYN1 266 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 TRAPPC2LQ9UL33 140 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 MEMO1Q9Y316 297 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 RBM7Q9Y580 266 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 IGKV1D-13A0A0B4J2D9 117 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 LRP5LA4QPB2 252 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 LGALS8O00214 317 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 HSPA12AO43301 675 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 CNOT4O95628 575 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 OR2H2O95918 312 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 NAPSAO96009 420 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 IGKV1-13P0DP09 117 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 RRASP10301 218 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 COX5AP20674 150 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 BMP5P22003 454 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 GNRHRP30968 328 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 ZNF345Q14585 488 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 TMEM187Q14656 261 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 SMCO1Q147U7 214 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 HERPUD1Q15011 391 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 AANATQ16613 207 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 ZNF718Q3SXZ3 478 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 THOC7Q6I9Y2 204 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 PRSS54Q6PEW0 395 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 IGFL3Q6UXB1 125 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 ZNF818PQ6ZRF7 136 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 BEND4Q6ZU67 534 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 CISD2Q8N5K1 135 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 CCDC71LQ8N9Z2 235 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 POC1AQ8NBT0 407 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 MRPL30Q8TCC3 161 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 GLYATL2Q8WU03 294 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 PIK3IP1Q96FE7 263 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 KIRREL1Q96J84 757 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 TP53RKQ96S44 253 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 SCNM1Q9BWG6 230 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 SPACA1Q9HBV2 294 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 CCL28Q9NRJ3 127 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 DECR2Q9NUI1 292 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 RCC2Q9P258 522 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 PFDN2Q9UHV9 154 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 KIF25Q9UIL4 384 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 PURGQ9UJV8 347 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 POLDIP2Q9Y2S7 368 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 UBE2J1Q9Y385 318 aaPredicted RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 ATP23Q9Y6H3 246 aa4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 SONP18583 2426 aaKnown RBP4.13□□□□□ -1.75
TM4SF1-202ENST00000472441 IGHV1-18A0A0C4DH31 117 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 IGKV1-6A0A0C4DH72 117 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 KIR2DS1A0A191URI9 304 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 C3orf85A0A1B0GTC6 90 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 MBD3L4A6NDZ8 208 aaPredicted RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 MBD3L3A6NE82 208 aaPredicted RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 MBD3L5A6NJ08 208 aaPredicted RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 OR5H1A6NKK0 313 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 IQCF6A8MYZ5 107 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 PRSS44E7EML9 344 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 SLC33A1O00400 549 aaPredicted RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 SH2D1BO14796 132 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 MPPED1O15442 326 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 MLNRO43193 412 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 CGAP01215 116 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 CRYABP02511 175 aaKnown RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 HOXB1P14653 301 aaPredicted RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 PMELP40967 661 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 KIR2DS4P43632 304 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 P2RX3P56373 397 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 KIR2DS1Q14954 304 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 TMEM268Q5VZI3 342 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 RGS7BPQ6MZT1 257 aaPredicted RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 ZNF474Q6S9Z5 364 aaPredicted RBP4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 FAM180AQ6UWF9 173 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 TBC1D26Q86UD7 250 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 LGI3Q8N145 548 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 GAPTQ8N292 157 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 OR8G5Q8NG78 346 aa4.12□□□□□ -1.75
TM4SF1-202ENST00000472441 OR10J5Q8NHC4 309 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms