RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 FAM90A18PA6NE21 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A16PA6NEW6 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A20PA6NIJ5 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A8PA6NJQ4 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A7PA6NKC0 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A22PA8MWA6 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A12PA8MX19 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A5PA8MXJ8 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A23PA8MXZ1 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 TRDCB7Z8K6 153 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 TK1P04183 234 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A15PP0C7V4 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A13PP0C7W8 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A14PP0C7W9 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A24PP0C7X0 464 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 KIR2DL2P43627 348 aaPredicted RBP12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FHITP49789 147 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 PSG7Q13046 419 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 ZNF826PQ6ZT77 177 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 LGI3Q8N145 548 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 LRTM2Q8N967 370 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 TAAR6Q96RI8 345 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 PIGMQ9H3S5 423 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 RCL1Q9Y2P8 373 aaKnown RBP12.76□□□□□ -0.37
UBXN11-213ENST00000472155 MPC1Q9Y5U8 109 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 ATP23Q9Y6H3 246 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 MED6O75586 246 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 C1QL1O75973 258 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 GRPP07492 148 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 PMELP40967 661 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 ZNF154Q13106 437 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 GABRA6Q16445 453 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 MPV17LQ2QL34 196 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 CXorf66Q5JRM2 361 aaPredicted RBP12.76□□□□□ -0.37
UBXN11-213ENST00000472155 Q6P435 159 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 FAM214BQ7L5A3 538 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 ZNF573Q86YE8 665 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 SYT3Q9BQG1 590 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 SH3BGRL3Q9H299 93 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 ESRP2Q9H6T0 727 aaKnown RBP12.76□□□□□ -0.37
UBXN11-213ENST00000472155 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 ACACAQ13085 2346 aa12.76□□□□□ -0.37
UBXN11-213ENST00000472155 WNT9BO14905 357 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 TUSC2O75896 110 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBXN11-213ENST00000472155 IL24Q13007 206 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 SMCO1Q147U7 214 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 OR1J1Q8NGS3 322 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 TINAGQ9UJW2 476 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 UBE2J1Q9Y385 318 aaPredicted RBP12.75□□□□□ -0.37
UBXN11-213ENST00000472155 USF3Q68DE3 2245 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 TMEM218A2RU14 115 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 IGHG3P01860 377 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 UBE2NP61088 152 aaKnown RBP12.75□□□□□ -0.37
UBXN11-213ENST00000472155 ZNF273Q14593 569 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 ALKBH2Q6NS38 261 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 SELENOHQ8IZQ5 122 aaKnown RBP12.75□□□□□ -0.37
UBXN11-213ENST00000472155 OR4D5Q8NGN0 318 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 LUZP4Q9P127 313 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 ZNF175Q9Y473 711 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 A0A0G2JRQ6 117 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 OR5B21A6NL26 309 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 C9JQL5 133 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 PROB1E7EW31 1015 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 DNASE2O00115 360 aaPredicted RBP12.75□□□□□ -0.37
UBXN11-213ENST00000472155 SLC34A2O95436 690 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 ATF4P18848 351 aaPredicted RBP12.75□□□□□ -0.37
UBXN11-213ENST00000472155 Q6ZS49 121 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
UBXN11-213ENST00000472155 TLNRD1Q9H1K6 362 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 CDH20Q9HBT6 801 aa12.75□□□□□ -0.37
UBXN11-213ENST00000472155 APC2O95996 2303 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 ROS1P08922 2347 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 CHD3Q12873 2000 aaKnown RBP12.74□□□□□ -0.37
UBXN11-213ENST00000472155 FAM24AA6NFZ4 105 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 DEGS1O15121 323 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 ADAM20O43506 726 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 OR2H2O95918 312 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 GLAP06280 429 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 OMGP23515 440 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 GUSBP1Q15486 140 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 ZNF565Q8N9K5 539 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 OR51H1Q8NH63 302 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
UBXN11-213ENST00000472155 PCNX1Q96RV3 2341 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 J3QT63 122 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 TMEM50AO95807 157 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 MUC1P15941 1255 aaPredicted RBP12.74□□□□□ -0.37
UBXN11-213ENST00000472155 UCP2P55851 309 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 ZNF324BQ6AW86 544 aaPredicted RBP12.74□□□□□ -0.37
UBXN11-213ENST00000472155 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 PUSL1Q8N0Z8 303 aaKnown RBP12.74□□□□□ -0.37
UBXN11-213ENST00000472155 RPRMLQ8N4K4 120 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 WDR31Q8NA23 367 aa12.74□□□□□ -0.37
UBXN11-213ENST00000472155 KLF14Q8TD94 323 aaPredicted RBP12.74□□□□□ -0.37
UBXN11-213ENST00000472155 A0A1B0GW55 424 aa12.73□□□□□ -0.37
UBXN11-213ENST00000472155 E5RGE8 158 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms