RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MAP3K5Q99683 1374 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 CLUHO75153 1309 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 C7orf66A4D0T2 115 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 TMEM250H0YL14 139 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 BET1O15155 118 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 PFDN6O15212 129 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 CD99P14209 185 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 S100A2P29034 98 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 ZNF83P51522 516 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 MAGOHP61326 146 aaKnown RBP4.02□□□□□ -1.77
SMC5-202ENST00000471372 PAFAH1B3Q15102 231 aaKnown RBP4.02□□□□□ -1.77
SMC5-202ENST00000471372 CENPWQ5EE01 88 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 FAM104BQ5XKR9 115 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 SPNS3Q6ZMD2 512 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 ZNRF2Q8NHG8 242 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 DTD1Q8TEA8 209 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 PEBP4Q96S96 227 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 FAM60AQ9NP50 221 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMC5-202ENST00000471372 ATRNO75882 1429 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 COL16A1Q07092 1604 aaPredicted RBP4.02□□□□□ -1.77
SMC5-202ENST00000471372 PCM1Q15154 2024 aa4.02□□□□□ -1.77
SMC5-202ENST00000471372 BRD4O60885 1362 aaPredicted RBP4.02□□□□□ -1.77
SMC5-202ENST00000471372 LOXHD1Q8IVV2 1947 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 IZUMO1RA6ND01 250 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 NRASP01111 189 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 HRASP01112 189 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 KRASP01116 189 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 IGHV1-46P01743 117 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 IL4P05112 153 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 C8orf88P0DMB2 117 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 HSPA13P48723 471 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 NUDT2P50583 147 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 PFN3P60673 137 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 C1DQ13901 141 aaKnown RBP4.01□□□□□ -1.77
SMC5-202ENST00000471372 SPATA31B1PQ5VZV4 182 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 Q8N402 240 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 OR5D18Q8NGL1 313 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 OR8S1Q8NH09 359 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 ERMNQ8TAM6 284 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 SLC37A2Q8TED4 501 aa4.01□□□□□ -1.77
SMC5-202ENST00000471372 LRRN3E7EW58 273 aa4□□□□□ -1.77
SMC5-202ENST00000471372 SSNA1O43805 119 aa4□□□□□ -1.77
SMC5-202ENST00000471372 ZNF324O75467 553 aaPredicted RBP4□□□□□ -1.77
SMC5-202ENST00000471372 ARL6IP5O75915 188 aa4□□□□□ -1.77
SMC5-202ENST00000471372 KCNK2O95069 426 aa4□□□□□ -1.77
SMC5-202ENST00000471372 APOEP02649 317 aa4□□□□□ -1.77
SMC5-202ENST00000471372 TGM4P49221 684 aa4□□□□□ -1.77
SMC5-202ENST00000471372 SULT1A2P50226 295 aa4□□□□□ -1.77
SMC5-202ENST00000471372 CTAG1AP78358 180 aa4□□□□□ -1.77
SMC5-202ENST00000471372 LAIR2Q6ISS4 152 aa4□□□□□ -1.77
SMC5-202ENST00000471372 ZNF880Q6PDB4 577 aa4□□□□□ -1.77
SMC5-202ENST00000471372 FAM131AQ6UXB0 335 aa4□□□□□ -1.77
SMC5-202ENST00000471372 VN1R4Q7Z5H5 301 aa4□□□□□ -1.77
SMC5-202ENST00000471372 OSR2Q8N2R0 312 aa4□□□□□ -1.77
SMC5-202ENST00000471372 ZFP62Q8NB50 900 aaPredicted RBP4□□□□□ -1.77
SMC5-202ENST00000471372 OR8A1Q8NGG7 326 aa4□□□□□ -1.77
SMC5-202ENST00000471372 RTN4IP1Q8WWV3 396 aaPredicted RBP4□□□□□ -1.77
SMC5-202ENST00000471372 MAL2Q969L2 176 aa4□□□□□ -1.77
SMC5-202ENST00000471372 TAMM41Q96BW9 452 aa4□□□□□ -1.77
SMC5-202ENST00000471372 MROQ9BYG7 248 aa4□□□□□ -1.77
SMC5-202ENST00000471372 PLA2G12AQ9BZM1 189 aa4□□□□□ -1.77
SMC5-202ENST00000471372 SNX10Q9Y5X0 201 aa4□□□□□ -1.77
SMC5-202ENST00000471372 DNMT1P26358 1616 aaKnown RBP3.99□□□□□ -1.77
SMC5-202ENST00000471372 IGKV2D-24A0A075B6R9 120 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 IGHV1-45A0A0A0MS14 117 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 C21orf140B9A014 251 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 CXCR6O00574 342 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 STX10O60499 249 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 CNTFRP26992 372 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 AGTR1P30556 359 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 EBI3Q14213 229 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 MRPL2Q5T653 305 aaKnown RBP3.99□□□□□ -1.77
SMC5-202ENST00000471372 DAZ4Q86SG3 579 aaKnown RBP3.99□□□□□ -1.77
SMC5-202ENST00000471372 OR4C13Q8NGP0 309 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 ASB13Q8WXK3 278 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 PTH2Q96A98 100 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 REEP6Q96HR9 211 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 PACRGQ96M98 296 aaPredicted RBP3.99□□□□□ -1.77
SMC5-202ENST00000471372 DHRS9Q9BPW9 319 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 DAZ1Q9NQZ3 744 aaKnown RBP3.99□□□□□ -1.77
SMC5-202ENST00000471372 SLC22A7Q9Y694 548 aa3.99□□□□□ -1.77
SMC5-202ENST00000471372 RPRD2Q5VT52 1461 aaKnown RBP3.98□□□□□ -1.77
SMC5-202ENST00000471372 PLB1Q6P1J6 1458 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 YEATS2Q9ULM3 1422 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 TGOLN2O43493 480 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 IFNA5P01569 189 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 NKX2-5P52952 324 aaPredicted RBP3.98□□□□□ -1.77
SMC5-202ENST00000471372 FUT5Q11128 374 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 RGS21Q2M5E4 152 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 HENMT1Q5T8I9 393 aaKnown RBP3.98□□□□□ -1.77
SMC5-202ENST00000471372 OGFRL1Q5TC84 451 aaPredicted RBP3.98□□□□□ -1.77
SMC5-202ENST00000471372 CST9Q5W186 159 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 TBPL2Q6SJ96 375 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 TMEM144Q7Z5S9 345 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 ST20-AS1Q8NBB2 130 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 HAVCR2Q8TDQ0 301 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 RBPMSQ93062 196 aaKnown RBP3.98□□□□□ -1.77
SMC5-202ENST00000471372 CYYR1Q96J86 154 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms