RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SLC34A2O95436 690 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 RAB5AP20339 215 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 ASCL1P50553 236 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 GPM6AP51674 278 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 EIF2S3LQ2VIR3 472 aaKnown RBP11.68□□□□□ -0.54
BRCA1-209ENST00000470026 BATF2Q8N1L9 274 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 PLK3Q9H4B4 646 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 OPA3Q9H6K4 179 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 KIAA1456Q9P272 454 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 RNF115Q9Y4L5 304 aa11.68□□□□□ -0.54
BRCA1-209ENST00000470026 DOCK10Q96BY6 2186 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 NEURL1O76050 574 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 IGHV2-5P01817 119 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 S100A8P05109 93 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 SLC25A6P12236 298 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 PAX9P55771 341 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 CCL20P78556 96 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 HIKESHIQ53FT3 197 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 SPIN3Q5JUX0 258 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 CDCP2Q5VXM1 449 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 MRPL21Q7Z2W9 205 aaKnown RBP11.67□□□□□ -0.54
BRCA1-209ENST00000470026 SUMF1Q8NBK3 374 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 OR2M7Q8NG81 312 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 MRPL30Q8TCC3 161 aaKnown RBP11.67□□□□□ -0.54
BRCA1-209ENST00000470026 ISOC2Q96AB3 205 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 POM121L2Q96KW2 1035 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 FAM173AQ9BQD7 235 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 SEBOXQ9HB31 216 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-209ENST00000470026 CCL28Q9NRJ3 127 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 LRFN1Q9P244 771 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 IL36RNQ9UBH0 155 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 METTL1Q9UBP6 276 aaKnown RBP11.67□□□□□ -0.54
BRCA1-209ENST00000470026 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
BRCA1-209ENST00000470026 C5orf49A4QMS7 147 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 RBFOX3A6NFN3 312 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 TRAPPC2LH3BP13 241 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 HSPA12AO43301 675 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 SSSCA1O60232 199 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-209ENST00000470026 HLA-HP01893 362 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 FOXG1P55316 489 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-209ENST00000470026 OR8G1Q15617 311 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 OR5C1Q8NGR4 320 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 GNPNAT1Q96EK6 184 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-209ENST00000470026 RARRES2Q99969 163 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 ABHD14AQ9BUJ0 271 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 CNTRLQ7Z7A1 2325 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 A0A1W2PPE3 182 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 MED19A0JLT2 244 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-209ENST00000470026 DAOP14920 347 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 DYNLT3P51808 116 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 VAMP2P63027 116 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF324BQ6AW86 544 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-209ENST00000470026 SPINK14Q6IE38 97 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 DPPA3Q6W0C5 159 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 TUSC5Q8IXB3 177 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 IL22RA1Q8N6P7 574 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 OR5P3Q8WZ94 311 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 ZPBPQ9BS86 351 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 CABLES2Q9BTV7 478 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 C20orf24Q9BUV8 137 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 MAGT1Q9H0U3 335 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 TAAR3PQ9P1P4 343 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 LOXL2Q9Y4K0 774 aa11.66□□□□□ -0.54
BRCA1-209ENST00000470026 A0A096LPE4 126 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 A0A1W2PPZ6 126 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 KIAA1324LA8MWY0 1029 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-209ENST00000470026 SYNGR1O43759 233 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 OR13C7P0DN81 318 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 EPHA1P21709 976 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 F2RP25116 425 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 IL24Q13007 206 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 TGIF1Q15583 401 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 SOHLH1Q5JUK2 328 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 CMTM1Q8IZ96 169 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 SUMF2Q8NBJ7 301 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-209ENST00000470026 WDFY3Q8IZQ1 3526 aa11.65□□□□□ -0.54
BRCA1-209ENST00000470026 PIGBOS1A0A0B4J2F0 54 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 CD300LBA8K4G0 201 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 NPIPB11E5RHQ5 1161 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 HSD17B6O14756 317 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 GPR37O15354 613 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 NGFP01138 241 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 CELA3AP09093 270 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 SRP19P09132 144 aaKnown RBP11.65□□□□□ -0.55
BRCA1-209ENST00000470026 CCL2P13500 99 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 ARR3P36575 388 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 RPS23P62266 143 aaKnown RBP11.65□□□□□ -0.55
BRCA1-209ENST00000470026 KRBOX4Q5JUW0 171 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 C20orf204Q6ZNR8 217 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 H1FOOQ8IZA3 346 aaPredicted RBP11.65□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF295-AS1Q8N0V1 137 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 FAM24BQ8N5W8 94 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 CD300LFQ8TDQ1 290 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 GPHA2Q96T91 129 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms