RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 LCN2P80188 198 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 AESQ08117 197 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 C11orf91Q3C1V1 193 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ARSJQ5FYB0 599 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-216ENST00000468949 PLAC9Q5JTB6 97 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 C6orf183Q5T699 404 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 HACD4Q5VWC8 232 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 WDR25Q64LD2 544 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-216ENST00000468949 SLC35E4Q6ICL7 350 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 TRAT1Q6PIZ9 186 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4L9Q6RFH8 374 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-216ENST00000468949 C17orf107Q6ZR85 190 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 BIVMQ86UB2 503 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 NUDCD2Q8WVJ2 157 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DYRK2Q92630 601 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 TSC22D3Q99576 134 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 SULT4A1Q9BR01 284 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 MIXL1Q9H2W2 232 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 GAL3ST2Q9H3Q3 398 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 LPAR2Q9HBW0 351 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF581Q9P0T4 197 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ONECUT1Q9UBC0 465 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 CTSZQ9UBR2 303 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 DUX4Q9UBX2 424 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 AK3Q9UIJ7 227 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 MAB21L2Q9Y586 359 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 ITPR3Q14573 2671 aa6.75□□□□□ -1.33
HDAC6-216ENST00000468949 LOC105371242A0A075B767 164 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 PPIAL4CA0A0B4J2A2 164 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 A0A0G2JMP0 313 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 A0A0X1KG70 313 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 KIR2DS1A0A191URI9 304 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ODAMA1E959 279 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 SULT1C2O00338 296 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 SMAD7O15105 426 aaKnown RBP6.74□□□□□ -1.33
HDAC6-216ENST00000468949 PHF1O43189 567 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-216ENST00000468949 SPINT2O43291 252 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 TPPPO94811 219 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 INHBBP09529 407 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 WNT2P09544 360 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 PPIAL4GP0DN37 164 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 DTYMKP23919 212 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 PTBP1P26599 531 aaKnown RBP eCLIP6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ERP29P30040 261 aaKnown RBP6.74□□□□□ -1.33
HDAC6-216ENST00000468949 KIR2DS4P43632 304 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 GZMKP49863 264 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ARPC4P59998 168 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF45Q02386 682 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 LOXL1Q08397 574 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-216ENST00000468949 KIR2DS1Q14954 304 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF260Q3ZCT1 412 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 TRIQKQ629K1 86 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 SIGIRRQ6IA17 410 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF497Q6ZNH5 498 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 LINC00299Q6ZSB3 139 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 BTN2A1Q7KYR7 527 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 PRR18Q8N4B5 295 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 TPRX1Q8N7U7 411 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF565Q8N9K5 539 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 OR4M2Q8NGB6 313 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 OR4K15Q8NH41 348 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 PLPPR1Q8TBJ4 325 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 CCDC107Q8WV48 283 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 FCAMRQ8WWV6 532 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 AUNIPQ9H7T9 357 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 SCPEP1Q9HB40 452 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF286AQ9HBT8 521 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.74□□□□□ -1.33
HDAC6-216ENST00000468949 KIF25Q9UIL4 384 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 LINC00312Q9Y6C7 94 aa6.74□□□□□ -1.33
HDAC6-216ENST00000468949 MEIS3P1A6NDR6 274 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 FOXI3A8MTJ6 420 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 B4DSR2 109 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 GABARAPH6UMI1 98 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 LCE2BO14633 110 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 LIPFP07098 398 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 FCGR3AP08637 254 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 GSTT2BP0CG30 244 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 AMY2BP19961 511 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 RCVRNP35243 200 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 GLIPR1P48060 266 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 TMEM50BP56557 158 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 AP3S2P59780 193 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 SEC61A1P61619 476 aaKnown RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 LMO4P61968 165 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 MEF2CQ06413 473 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF846Q147U1 533 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 RSBN1Q5VWQ0 802 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 DNM1P46Q6ZS02 220 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 CCDC190Q86UF4 302 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 GLCCI1Q86VQ1 547 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 Q8N402 240 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 MRGPRDQ8TDS7 321 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 GCDHQ92947 438 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 COQ2Q96H96 371 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 ZNF714Q96N38 554 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 HDHD3Q9BSH5 251 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-216ENST00000468949 DCTN5Q9BTE1 182 aa6.73□□□□□ -1.33
HDAC6-216ENST00000468949 ST6GALNAC5Q9BVH7 336 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms