RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SMAD9O15198 467 aaKnown RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 NDUFS4O43181 175 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 HCRTR1O43613 425 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 C1QL1O75973 258 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CLDN7O95471 211 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 DDAH2O95865 285 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 HLA-DRB1P01911 266 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SERPINA7P05543 415 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 HPNP05981 417 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CRYGCP07315 174 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 NGFRP08138 427 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CYC1P08574 325 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 HIST1H1CP16403 213 aaKnown RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ALOX5APP20292 161 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 MALP21145 153 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 TSPOP30536 169 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CCKBRP32239 447 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 GUCA1AP43080 201 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 RGRP47804 291 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SOX2P48431 317 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SPINT3P49223 89 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PSMB3P49720 205 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF136P52737 540 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 UCP3P55916 312 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 RAB38P57729 211 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ERVS71-1P61550 626 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PPP1CBP62140 327 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SUPT4H1P63272 117 aaKnown RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CSNK2A1P68400 391 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 TLE1Q04724 770 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 FMODQ06828 376 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 FUT5Q11128 374 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 MMDQ15546 238 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 C5orf64Q2M2E5 130 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PRTGQ2VWP7 1150 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ANKRD55Q3KP44 614 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SPATA45Q537H7 98 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PSMG4Q5JS54 123 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 KIAA0895LQ68EN5 471 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SLC18B1Q6NT16 456 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 INO80CQ6PI98 192 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PLXDC2Q6UX71 529 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 C16orf82Q7Z2V1 217 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF761Q86XN6 746 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF280BQ86YH2 543 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CFAP52Q8N1V2 620 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 MUC15Q8N387 334 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 STPG4Q8N801 248 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CSNK2A3Q8NEV1 391 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 OR5D14Q8NGL3 314 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 OR10S1Q8NGN2 331 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 OR1K1Q8NGR3 316 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF480Q8WV37 535 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM37Q8WXS4 190 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM230Q96A57 120 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 MRGPRFQ96AM1 343 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM186Q96B77 213 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SPACA9Q96E40 222 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 LOXL4Q96JB6 756 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SLC46A1Q96NT5 459 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SIGLEC12Q96PQ1 595 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SIGMAR1Q99720 223 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 RARRES2Q99969 163 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 WFDC6Q9BQY6 131 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 RTBDNQ9BSG5 229 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SPXQ9BT56 116 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 RSPO3Q9BXY4 272 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 SAMD10Q9BYL1 202 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 STRADBQ9C0K7 418 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 LPAR5Q9H1C0 372 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ST20Q9HBF5 79 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 TUBG2Q9NRH3 451 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 EHFQ9NZC4 300 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF319Q9P2F9 582 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PPP1R3CQ9UQK1 317 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PAM16Q9Y3D7 125 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 LSM5Q9Y4Y9 91 aaKnown RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 IER3IP1Q9Y5U9 82 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 MDC1Q14676 2089 aaKnown RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 NUP210Q8TEM1 1887 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 A0A0D9SEW6 157 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 A4D1N5 150 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 MBD3L4A6NDZ8 208 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 MBD3L3A6NE82 208 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SERINC4A6NH21 518 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ARL5CA6NH57 179 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A27PA6NNH2 459 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 HIDE1A8MVS5 230 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 OR11H12B2RN74 326 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 DIRC3C9JPN6 131 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 M0R1X1 148 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 PTGESO14684 152 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 HS3ST1O14792 307 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 MPPED1O15442 326 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 KLK10O43240 276 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 B4GALT2O60909 372 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 HYPMO75409 117 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 LYPD3O95274 346 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms