RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 AGAP20933 346 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF266Q14584 549 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 BEND4Q6ZU67 534 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 GPHA2Q96T91 129 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 MAGT1Q9H0U3 335 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 TREM2Q9NZC2 230 aa13.56□□□□□ -0.24
TSPAN4-211ENST00000468468 A0A1W2PNU3 283 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 CXorf65A6NEN9 183 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 C9orf172C9J069 976 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 SSSCA1O60232 199 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 TK1P04183 234 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 SCTP09683 121 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 CCNOP22674 350 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 ATP6V0CP27449 155 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 GDF1P27539 372 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 EIF2S3P41091 472 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 SULT1A1P50225 295 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 SELENOHQ8IZQ5 122 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM24BQ8N5W8 94 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 OR56B2PQ8NGI1 322 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 TMEM56Q96MV1 263 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 TAAR9Q96RI9 348 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 RARRES2Q99969 163 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 PRDM14Q9GZV8 571 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 PLEKHF2Q9H8W4 249 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 DEPPQ9NTK1 212 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 hCG_1809904A0A1W2PP81 198 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 A0A1W2PR64 198 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 A0A1W2PRV1 198 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 CYTIPO60759 359 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 CD59P13987 128 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 RAB5AP20339 215 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 RHEBQ15382 184 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF818PQ6ZRF7 136 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF383Q8NA42 475 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 OR1J1Q8NGS3 322 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 SPIN2AQ99865 258 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 SPIN2BQ9BPZ2 258 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 ABHD14AQ9BUJ0 271 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 STRADBQ9C0K7 418 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 Q9N2K0 584 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 FOXJ2Q9P0K8 574 aa13.55□□□□□ -0.24
TSPAN4-211ENST00000468468 A0A1W2PPE2 198 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 ZNF724A8MTY0 619 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 PPIHO43447 177 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 ADAM20O43506 726 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 ITGA3P26006 1051 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 OR2B8PP59922 312 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 VAMP2P63027 116 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 PYY3Q5JQD4 70 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 C9orf135Q5VTT2 229 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 GAPTQ8N292 157 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 ZFP62Q8NB50 900 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 CPNE4Q96A23 557 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 PITX3O75364 302 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 IGHV2-5P01817 119 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 IGHEP01854 428 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 CCL20P78556 96 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 PRDX4Q13162 271 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 TMEM252Q8N6L7 170 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 SUMF2Q8NBJ7 301 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 Q8NFD4 153 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 SLC25A31Q9H0C2 315 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 PUS1Q9Y606 427 aaKnown RBP eCLIP13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 AHCTF1Q8WYP5 2266 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 A0A1B0GW64 132 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 PINLYPA6NC86 204 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A10PA6NDY2 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A18PA6NE21 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A16PA6NEW6 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A20PA6NIJ5 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 ARGFXA6NJG6 315 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A8PA6NJQ4 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A7PA6NKC0 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A22PA8MWA6 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A12PA8MX19 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A5PA8MXJ8 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 CDRT15L2A8MXV6 281 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A23PA8MXZ1 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 HSPB6O14558 160 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A15PP0C7V4 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A13PP0C7W8 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A14PP0C7W9 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FAM90A24PP0C7X0 464 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 CCL2P13500 99 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 GPM6AP51674 278 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 SOHLH1Q5JUK2 328 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 PLA2G2CQ5R387 149 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 TMEM171Q8WVE6 324 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 TCTEX1D2Q8WW35 142 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 FGF23Q9GZV9 251 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 LYRM2Q9NU23 88 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 CRIM1Q9NZV1 1036 aa13.54□□□□□ -0.24
TSPAN4-211ENST00000468468 IGKV1D-13A0A0B4J2D9 117 aa13.53□□□□□ -0.24
TSPAN4-211ENST00000468468 HSD17B6O14756 317 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms