RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 GPR35Q9HC97 309 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 SLC7A10Q9NS82 523 aa12.64□□□□□ -0.39
PRPF38B-204ENST00000467302 ARGFXA6NJG6 315 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 CBR1P16152 277 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 ATP6V0CP27449 155 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF266Q14584 549 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 SRSF7Q16629 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 ATP1A1-AS1Q5TC04 95 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 SP5Q6BEB4 398 aaPredicted RBP12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 DPPA2Q7Z7J5 298 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 TBC1D26Q86UD7 250 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM24BQ8N5W8 94 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 TMEM251Q8N6I4 163 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 SNIP1Q8TAD8 396 aaKnown RBP12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 CD300LFQ8TDQ1 290 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 TMEM45BQ96B21 275 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 ABHD14BQ96IU4 210 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 RARRES2Q99969 163 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 LYRM2Q9NU23 88 aaPredicted RBP12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 RFNGQ9Y644 331 aa12.63□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF724A8MTY0 619 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A22PA8MWA6 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 KLRC4-KLRK1H3BQV0 150 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 ARG1P05089 322 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A15PP0C7V4 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A13PP0C7W8 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A14PP0C7W9 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM90A24PP0C7X0 464 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 OR13C7P0DN81 318 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 CD46P15529 392 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 CLDN18P56856 261 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 SOX8P57073 446 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 POLR2GP62487 172 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 RAB1AP62820 205 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 CCL20P78556 96 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 SPSB3Q6PJ21 355 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 COLCA1Q6ZS62 124 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 SELENOHQ8IZQ5 122 aaKnown RBP12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 PRSS33Q8NF86 280 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 OR8G5Q8NG78 346 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 NANPQ8TBE9 248 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 PRDM14Q9GZV8 571 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 PLEKHF2Q9H8W4 249 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 ASCL3Q9NQ33 180 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 PARPBPQ9NWS1 579 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 A0A1W2PPE2 198 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 CLEC18AA5D8T8 446 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 PROB1E7EW31 1015 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 NAPSAO96009 420 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF14P17017 642 aaPredicted RBP12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 MEOX1P50221 254 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FABP9Q0Z7S8 132 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 IGF2-ASQ6U949 168 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 SLC16A13Q7RTY0 426 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 ODF3L1Q8IXM7 274 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 TMEM252Q8N6L7 170 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 CLEC18CQ8NCF0 446 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 CPEB3Q8NE35 698 aaKnown RBP12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 OR2G3Q8NGZ4 309 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 EXTL1Q92935 676 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 SPIN2AQ99865 258 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 SPIN2BQ9BPZ2 258 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 ABHD14AQ9BUJ0 271 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 PAPOLGQ9BWT3 736 aaKnown RBP12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 Q9N2K0 584 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 FAM86C1Q9NVL1 165 aa12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 NOSIPQ9Y314 301 aaKnown RBP12.62□□□□□ -0.39
PRPF38B-204ENST00000467302 IGKV3D-15A0A087WSY6 115 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 A0A1B0GV50 99 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 GPR37O15354 613 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 SYNGR4O95473 234 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 RPS23P62266 143 aaKnown RBP12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 NMSQ5H8A3 153 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 CXorf66Q5JRM2 361 aaPredicted RBP12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 SOHLH1Q5JUK2 328 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF818PQ6ZRF7 136 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 BATF2Q8N1L9 274 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 ZNF251Q9BRH9 671 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 FGF23Q9GZV9 251 aaPredicted RBP12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 GLRX2Q9NS18 164 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 UBE2J1Q9Y385 318 aaPredicted RBP12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 MED13Q9UHV7 2174 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 SSSCA1O60232 199 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 MRPL33O75394 65 aaKnown RBP12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 TUSC2O75896 110 aa12.61□□□□□ -0.39
PRPF38B-204ENST00000467302 TK1P04183 234 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms