RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 FAM90A14PP0C7W9 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM90A24PP0C7X0 464 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FAM106CPP0CH98 169 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 PRR23D2P0DMB1 279 aaPredicted RBP11.35□□□□□ -0.59
CXCR4-203ENST00000466288 CPEP16870 476 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 SLC35B1P78383 322 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 TPBGQ13641 420 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 GRK1Q15835 563 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 C5orf56Q8N8D9 126 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 NDUFB11Q9NX14 153 aa11.35□□□□□ -0.59
CXCR4-203ENST00000466288 UBE2J1Q9Y385 318 aaPredicted RBP11.35□□□□□ -0.59
CXCR4-203ENST00000466288 FRAS1Q86XX4 4008 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 PSPNO60542 156 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 CDK2P24941 298 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 CD34P28906 385 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 SOX6P35712 828 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 GDNFP39905 211 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 HCCSP53701 268 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 KIR2DS1Q14954 304 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 HLA-DRB5Q30154 266 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 CCDC144NLQ6NUI1 221 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 DEGS2Q6QHC5 323 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 HEPN1Q6WQI6 88 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 TMPRSS11AQ6ZMR5 421 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 THNSL2Q86YJ6 484 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 OR8U1Q8NH10 309 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
CXCR4-203ENST00000466288 CEP19Q96LK0 163 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 OPALINQ96PE5 141 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 DCSTAMPQ9H295 470 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 SEBOXQ9HB31 216 aaPredicted RBP11.34□□□□□ -0.59
CXCR4-203ENST00000466288 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 NUFIP1Q9UHK0 495 aaKnown RBP11.34□□□□□ -0.59
CXCR4-203ENST00000466288 STUB1Q9UNE7 303 aa11.34□□□□□ -0.59
CXCR4-203ENST00000466288 A6NIN4 97 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 J3QRE1 110 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 HAND1O96004 215 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 IGHG2P01859 326 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 TTRP02766 147 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 RPLP1P05386 114 aaKnown RBP11.33□□□□□ -0.6
CXCR4-203ENST00000466288 HSMCR30P0CW71 290 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 GABRR1P24046 479 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 GADD45AP24522 165 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
CXCR4-203ENST00000466288 CEACAM3P40198 252 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 MNDAP41218 407 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 VBP1P61758 197 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 ZNF846Q147U1 533 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 ZNF260Q3ZCT1 412 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 SLC35D3Q5M8T2 416 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 OVCH2Q7RTZ1 564 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 CPOQ8IVL8 374 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 STPG2Q8N412 459 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 ACBD7Q8N6N7 88 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 CREB3L1Q96BA8 519 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 NXF2Q9GZY0 626 aaKnown RBP11.33□□□□□ -0.6
CXCR4-203ENST00000466288 IL36RNQ9UBH0 155 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 LAMP5Q9UJQ1 280 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 SSR3Q9UNL2 185 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 V9GYS6 101 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 ALMS1Q8TCU4 4167 aa11.33□□□□□ -0.6
CXCR4-203ENST00000466288 OOSP1A8MZH6 123 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 PRR32B1ATL7 298 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 MGST3O14880 152 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 ERP29P30040 261 aaKnown RBP11.32□□□□□ -0.6
CXCR4-203ENST00000466288 ATP6V1E1P36543 226 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 P2RX3P56373 397 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 TAS2R43P59537 309 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 MFGE8Q08431 387 aaPredicted RBP11.32□□□□□ -0.6
CXCR4-203ENST00000466288 TRAM1Q15629 374 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 UTF1Q5T230 341 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 TEX38Q6PEX7 206 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 OR14K1Q8NGZ2 314 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 UFD1Q92890 307 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 SLIRPQ9GZT3 109 aaKnown RBP11.32□□□□□ -0.6
CXCR4-203ENST00000466288 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 A0A1B0GTI1 187 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 LINC01548A6NM66 108 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 FGF16O43320 207 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 LY86O95711 162 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 OR3A1P47881 315 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
CXCR4-203ENST00000466288 ETV1P50549 477 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 NCS1P62166 190 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 ROM1Q03395 351 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 SSX1Q16384 188 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 Q6ZSR3 168 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 BCDIN3DQ7Z5W3 292 aaKnown RBP11.32□□□□□ -0.6
CXCR4-203ENST00000466288 ZNF485Q8NCK3 441 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 OR56B4Q8NH76 319 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 TRMT10AQ8TBZ6 339 aaKnown RBP11.32□□□□□ -0.6
CXCR4-203ENST00000466288 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 CORO2AQ92828 525 aa11.32□□□□□ -0.6
CXCR4-203ENST00000466288 MROQ9BYG7 248 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms