RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 DHRS9Q9BPW9 319 aa11.63□□□□□ -0.55
HDAC6-215ENST00000465457 FGF23Q9GZV9 251 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-215ENST00000465457 IFT22Q9H7X7 185 aa11.63□□□□□ -0.55
HDAC6-215ENST00000465457 RCC2Q9P258 522 aaKnown RBP11.63□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF69Q9UC07 566 aa11.63□□□□□ -0.55
HDAC6-215ENST00000465457 CMYA5Q8N3K9 4069 aa11.63□□□□□ -0.55
HDAC6-215ENST00000465457 A0A1B0GWJ7 208 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 TIMM8AO60220 97 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 OR7C1O76099 320 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 ANXA7P20073 488 aaKnown RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 BCL3P20749 454 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 EFNA4P52798 201 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 ARPC4P59998 168 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 TSPAN5P62079 268 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 DEFA6Q01524 100 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 RBM39Q14498 530 aaKnown RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 C4orf46Q504U0 113 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 ATPAF1Q5TC12 328 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 RGS7BPQ6MZT1 257 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 SLC22A25Q6T423 547 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 FIP1L1Q6UN15 594 aaKnown RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 NOXA1Q86UR1 476 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 OR13C8Q8NGS7 320 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF431Q8TF32 576 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-215ENST00000465457 ST6GALNAC5Q9BVH7 336 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 C1QTNF6Q9BXI9 259 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 PPA2Q9H2U2 334 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF286AQ9HBT8 521 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 MTCH1Q9NZJ7 389 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 AK3Q9UIJ7 227 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 POU2F3Q9UKI9 436 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 NPTNQ9Y639 398 aa11.62□□□□□ -0.55
HDAC6-215ENST00000465457 PMP2P02689 132 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 FCGR3AP08637 254 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 OR4E1P0C645 316 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 FABP6P51161 128 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF83P51522 516 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 MPPED2Q15777 294 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 NKPD1Q17RQ9 610 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 SPIN3Q5JUX0 258 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 Q6ZS49 121 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 OR13G1Q8NGZ3 307 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 HYLS1Q96M11 299 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 FYTTD1Q96QD9 318 aaKnown RBP11.61□□□□□ -0.55
HDAC6-215ENST00000465457 SULT4A1Q9BR01 284 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 PIMREGQ9BSJ6 248 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 FAAP24Q9BTP7 215 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 BPESC1Q9GZL8 116 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 RANBP3Q9H6Z4 567 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF442Q9H7R0 627 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 NECAP2Q9NVZ3 263 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 ANXA10Q9UJ72 324 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF222Q9UK12 451 aa11.61□□□□□ -0.55
HDAC6-215ENST00000465457 VWFP04275 2813 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 MCRIP1C9JLW8 97 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 M0R1B8 84 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 LILRA1O75019 489 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 NOS1APO75052 506 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-215ENST00000465457 HPXP02790 462 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 CSN2P05814 226 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 GIPP09681 153 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-215ENST00000465457 VSIG10L2P0DP72 767 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF250P15622 560 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 FPR2P25090 351 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 CALCRP30988 508 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 GLRXP35754 106 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 SRP14P37108 136 aaKnown RBP11.6□□□□□ -0.55
HDAC6-215ENST00000465457 MPV17P39210 176 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 MDH2P40926 338 aaKnown RBP11.6□□□□□ -0.55
HDAC6-215ENST00000465457 NPBWR2P48146 333 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 COMPP49747 757 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-215ENST00000465457 SELENOVP59797 346 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 ERVS71-1P61550 626 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 LPCAT3Q6P1A2 487 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 OVCH2Q7RTZ1 564 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 SLC25A42Q86VD7 318 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 OR11H7Q8NGC8 314 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 NRIP2Q9BQI9 281 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 SEC22CQ9BRL7 303 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 ZNF436Q9C0F3 470 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-215ENST00000465457 TLNRD1Q9H1K6 362 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 BEX1Q9HBH7 125 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 EHFQ9NZC4 300 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 NOTCH1P46531 2555 aa11.6□□□□□ -0.55
HDAC6-215ENST00000465457 KIR2DS1A0A191URI9 304 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 SYNGR1O43759 233 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 GSTT2P0CG29 244 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 PRKACAP17612 351 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 PTAFRP25105 342 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 CD40P25942 277 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 KIR2DS4P43632 304 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 PDLIM4P50479 330 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 RAP2BP61225 183 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 ERVK11-1P61568 191 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 IKZF1Q13422 519 aa11.59□□□□□ -0.55
HDAC6-215ENST00000465457 KIR2DS1Q14954 304 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms