RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 VDAC1P21796 283 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 UCP2P55851 309 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 ZNF573Q86YE8 665 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 SUMF2Q8NBJ7 301 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 ABHD14BQ96IU4 210 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 CCL28Q9NRJ3 127 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 LYRM2Q9NU23 88 aaPredicted RBP15.67■□□□□ 0.1
SYNE4-204ENST00000465425 KLF2Q9Y5W3 355 aaPredicted RBP15.67■□□□□ 0.1
SYNE4-204ENST00000465425 CELSR3Q9NYQ7 3312 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 HS3ST1O14792 307 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 PITX3O75364 302 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 TUSC2O75896 110 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 AKR1C3P42330 323 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 C3AR1Q16581 482 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 ETV3LQ6ZN32 361 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 C15orf54Q8N8G6 183 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 LFNGQ8NES3 379 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 OR5P3Q8WZ94 311 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 C14orf79Q96F83 325 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 OR51B6Q9H340 312 aa15.67■□□□□ 0.1
SYNE4-204ENST00000465425 A0A1B0GV50 99 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 MED19A0JLT2 244 aaPredicted RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 IGSF23A1L1A6 192 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 M0R036 132 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 TNFSF12O43508 249 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 UCP1P25874 307 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 RPL35P42766 123 aaKnown RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 CLN3Q13286 438 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 CXorf66Q5JRM2 361 aaPredicted RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 NUFIP2Q7Z417 695 aaKnown RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 OR2G3Q8NGZ4 309 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 C2CD4CQ8TF44 421 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 RDH5Q92781 318 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 C11orf1Q9H5F2 150 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 MPC1Q9Y5U8 109 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 IGKV1-6A0A0C4DH72 117 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 COLCA2A8K830 154 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 WRBO00258 174 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 HSPA12AO43301 675 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 SNRNP70P08621 437 aaKnown RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 HOXA1P49639 335 aaPredicted RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 GNG3P63215 75 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 AWAT1Q58HT5 328 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 ZFP82Q8N141 532 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 LILRB1Q8NHL6 650 aaPredicted RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 SNIP1Q8TAD8 396 aaKnown RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 GTF3AQ92664 365 aaKnown RBP15.66■□□□□ 0.1
SYNE4-204ENST00000465425 ZNF488Q96MN9 340 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 C12orf49Q9H741 205 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 FBXO7Q9Y3I1 522 aa15.66■□□□□ 0.1
SYNE4-204ENST00000465425 OR5B21A6NL26 309 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 ZNF44P15621 663 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 SPINK2P20155 84 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 NMSQ5H8A3 153 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 TMEM252Q8N6L7 170 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 OR10J5Q8NHC4 309 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 CLCC1Q96S66 551 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 KCNJ16Q9NPI9 418 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 LNP1A1A4G5 178 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 UMAD1C9J7I0 102 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 H0Y980 276 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 K7N7A8 449 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 PAX6P26367 422 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 ATP6V0CP27449 155 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 MEOX1P50221 254 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 HIKESHIQ53FT3 197 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 IQCF2Q8IXL9 164 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 FAM58AQ8N1B3 248 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 OR5D13Q8NGL4 314 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 OR5C1Q8NGR4 320 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 MRPL30Q8TCC3 161 aaKnown RBP15.65■□□□□ 0.1
SYNE4-204ENST00000465425 SCRT1Q9BWW7 348 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 SLC35B3Q9H1N7 401 aa15.65■□□□□ 0.1
SYNE4-204ENST00000465425 KLF13Q9Y2Y9 288 aaPredicted RBP15.65■□□□□ 0.1
SYNE4-204ENST00000465425 CLEC18AA5D8T8 446 aa15.64■□□□□ 0.09
SYNE4-204ENST00000465425 RAB5BP61020 215 aa15.64■□□□□ 0.09
SYNE4-204ENST00000465425 CLEC18CQ8NCF0 446 aa15.64■□□□□ 0.09
SYNE4-204ENST00000465425 PRSS50Q9UI38 385 aa15.64■□□□□ 0.09
SYNE4-204ENST00000465425 A0A1W2PNU3 283 aaPredicted RBP15.63■□□□□ 0.09
SYNE4-204ENST00000465425 PCP4L1A6NKN8 68 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 KLRC4-KLRK1H3BQV0 150 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 LILRA1O75019 489 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 PGLYRP1O75594 196 aaPredicted RBP15.63■□□□□ 0.09
SYNE4-204ENST00000465425 NXPH3O95157 252 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 SP1P08047 785 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 PPP1CCP36873 323 aaKnown RBP15.63■□□□□ 0.09
SYNE4-204ENST00000465425 WNT5AP41221 380 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 C20orf204Q6ZNR8 217 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 C17orf78Q8N4C9 275 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 IL22RA1Q8N6P7 574 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 TMEM217Q8N7C4 229 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 KDF1Q8NAX2 398 aaPredicted RBP15.63■□□□□ 0.09
SYNE4-204ENST00000465425 ZFP62Q8NB50 900 aaPredicted RBP15.63■□□□□ 0.09
SYNE4-204ENST00000465425 CD300LFQ8TDQ1 290 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 TMEM171Q8WVE6 324 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 NANOS1Q8WY41 292 aaKnown RBP15.63■□□□□ 0.09
SYNE4-204ENST00000465425 IL22RA2Q969J5 263 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 TNRC6AQ8NDV7 1962 aaKnown RBP15.63■□□□□ 0.09
SYNE4-204ENST00000465425 C7orf77A4D0Y5 90 aa15.63■□□□□ 0.09
SYNE4-204ENST00000465425 PROB1E7EW31 1015 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms